Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02558 ATGGAAATTTCTAGTACCTGTAATGGCAGTAGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGATAAAAGCATACAAGGAATGTTCAGGAAATGCAAGCGCCTTGAGGTTGTGCATCAAGAAAGAGCATCTGAGAATTGGGCCTATTTGACAAGCATTGGCATTCAAGAGAGGAAACTCCCATCTATCGTTTCAAAATGTCCCAAGATTCTTACGCTTGGCCTTAATGAGAAGATAGTTCCCATGGTTGAATGCCTCAAGACGCTGGGAACGAAACCCAATGAAGTTGCTTCTGCCATAGCCAAGTTCCCTCAGTTACTCTCACATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTTCAGGCATTGGGCATCCCTGAAAAGCGACTTGGAAAAATAATACTGCTCAATCCAAGGCTTATCAGCTACAGCATTGAAACAAAGCTCACAGAGATTGTGGACTTCCTTGCTAGCCTTGGTCTAAATAAAGATGGTATGATTGGAAAAATTTTAGTCAGGAACCCATTTATTATGGGATATAGCGTCGATAAAAGACTCCGCCCTACTACTCAGTTTCTGAAATTAATTGGTCTGACTGATCTCGAACTTCAAGTGGTAGCTGTGAACTTCCCAGAAATTTTGAGTAGAGATGTGAACAAGGTTTTGGAGCCCAATTATTCGTACTTAAAGAAATCTGGATTTCAAGACAGACAGATAGCTGCTTTGGTAGTTGGATTTCCTCCAATCCTGATCAAGAGTATCCAAAATTCTCTAGAACCCAAGATAAGGTTTCTAGTAGATGTGATGGGAAGACAAATCCATGAAGTTGTTGACTATCCCGACTTCTTTCGTCATAGTCTGAAGAGAGAAATAGAGTTGCGGCACAAATTCTTGACACAGAGGAACTTAATTTGTAGCTTGAGTGAAATGCTTGACTGTAACAAGAAGAAGTTCTTCTTAAGATTTGGTTTATTAGAAGGACCTGTGTTGAGTAATAAGTTTTCATCCCACTTATAA 1026 0.3996 MEISSTCNGSSMMWFFKDRGFDDKSIQGMFRKCKRLEVVHQERASENWAYLTSIGIQERKLPSIVSKCPKILTLGLNEKIVPMVECLKTLGTKPNEVASAIAKFPQLLSHSVEEKLCPLLAFFQALGIPEKRLGKIILLNPRLISYSIETKLTEIVDFLASLGLNKDGMIGKILVRNPFIMGYSVDKRLRPTTQFLKLIGLTDLELQVVAVNFPEILSRDVNKVLEPNYSYLKKSGFQDRQIAALVVGFPPILIKSIQNSLEPKIRFLVDVMGRQIHEVVDYPDFFRHSLKREIELRHKFLTQRNLICSLSEMLDCNKKKFFLRFGLLEGPVLSNKFSSHL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02558 341 PANTHER CGI-12 PROTEIN-RELATED 133 253 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Accr4g02558 341 Gene3D Transcription termination factor 3, mitochondrial 1 111 IPR038538 -
Accr4g02558 341 Gene3D Transcription termination factor 3, mitochondrial 112 328 IPR038538 -
Accr4g02558 341 Pfam mTERF 15 124 IPR003690 GO:0003690|GO:0006355
Accr4g02558 341 Pfam mTERF 111 321 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g02558 mTERF 2.7e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02558 K15031 - gmx:100816929 544.273