Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02530 ATGCAGGTTTGTTCTACATGGCGAGCCATTTCCCGCTCGGATCACCTGTGGCAGCGGCTCACCAGATGCATCTGGCGTCGACCCCACAGAGTACGCGACACATGGCATGAGGAGTTCATCTTCTGGCATCGAACGGATAGAAATTATGTCACAGGCAGATACTTGTACTCCTCCGTACACTATAATCCCGCCCCGTTTGACGTAGACCCACCCAATCTTTGCCGTTGTCTCACCCTCTCCGACAACCACCTCGCTTGTGGCTTCGCTGACGGTACCGTCCGCCTCTTCGACCTGCAAACACGTGCCCACGTCATCACCTTCCGGTCCCACCACGATGACGTGTTGGGTCTTTTCTCGAGATCCGTGTCGGGGATTATCATCACAGATTCTACGCTGGTCTTTGCCACACTGGACGGAAACATCTACATCGCAGACATCAACGGGCCGCCCGATACCCACATAACCAGACCCGGTGCCATTCTGAGAAACGGCGTCTTGGTGGAGTTCGCCGGAAGTGGAAGGTGGTGGGTGGGCCTCTTCGCCGGCAGTCCGCATCAATCATTCCGTGTCTGGGACGCGCGCGGCGAGCAACCGGATTACACTGGCGGATCCTTGACAAACCCGTATTCCGTCCAGGGCTGGCACATGCTGACGGATATAACCGATCCGGTTGGCCGGTTGCGTGTCACCACTCGCGAGCTGGCCGTGGCATGCACGCGATCGAGGCTCGTAGTCTTCGATCTGAGGAACCCAGGGGTTTATTTGCGTGAGCTCGCGTCCAGAGTTGGCTTCATTGTGACCTCGCTGGACGTAAGCCACGAGACGTTGTTTATAGTGGAGAGGAGGGGCCGCGCTAGCGTGCGCCGGGCAAGCACGTTAGAGCCTCAATGTGAAGAATTTATGGTGGCGGCGGGACCGTCCCTGAGGGGGATGATCGGGTCCATGAACTTGGTCTATGTGCTAATATGCGCCGGTGGTGAAGTGAGATTGTGGAACGTGGAACTTGGAGCCGCGCATCTGCGTTTGACCATAAACGAAAGGGTCGGATTGGGTATGGCAATGGCTGCGAACGACAGAAACGTGGCGGTATCATGTAGAGACACGTCAATCCACCTCTGGGATTTTGGTGTACAGTAG 1137 0.5655 MQVCSTWRAISRSDHLWQRLTRCIWRRPHRVRDTWHEEFIFWHRTDRNYVTGRYLYSSVHYNPAPFDVDPPNLCRCLTLSDNHLACGFADGTVRLFDLQTRAHVITFRSHHDDVLGLFSRSVSGIIITDSTLVFATLDGNIYIADINGPPDTHITRPGAILRNGVLVEFAGSGRWWVGLFAGSPHQSFRVWDARGEQPDYTGGSLTNPYSVQGWHMLTDITDPVGRLRVTTRELAVACTRSRLVVFDLRNPGVYLRELASRVGFIVTSLDVSHETLFIVERRGRASVRRASTLEPQCEEFMVAAGPSLRGMIGSMNLVYVLICAGGEVRLWNVELGAAHLRLTINERVGLGMAMAANDRNVAVSCRDTSIHLWDFGVQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02530 378 PANTHER WD40 REPEAT PROTEIN 12, 37 4 297 - -
Accr4g02530 378 Gene3D - 69 376 IPR015943 GO:0005515
Accr4g02530 378 SUPERFAMILY F-box domain 2 49 IPR036047 GO:0005515
Accr4g02530 378 SUPERFAMILY WD40 repeat-like 76 375 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02530 Accr-Chr4 50173492 50174628 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Accr4g02530 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02530 - - pcin:129302822 440.269