Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02529 ATGGCTTCTTCTTCTTCTTCCTCACCACCACCTTCATCTTCCCCAGATGACACCGCCGCCGCCGCCCCCAACAATGGCGGTGGCTCTGATCCCACTGGCCCTAGCACCAGCCGGCGAAGAAGAAGACGTCGTCCTATGAACGAGGTTTTGCCTGAGCCTTTTCTTGAAGCTTTAGCCATTCAAATCGCCATTGAAGCTTCTCACTCTCATGGACGTCTCGCTACTGCTCCTTCCATTGCCAATCTCTTTCAGGTTTGTTCTACATGGCGAGCCATTTCCCGCTCGGATCACCTGTGGCAGCGGCTCACCAGATGCATCTGGCGTCGACCCCACAGAGTACGCGACACATGGCATGAGGAGTTCATCTTCTGGCATCGAACGGATAGAAATTATGTCACAGGCAGATACTTGTACTCCTCCGTACACTATAATCCCGCCCCGTTTGACGTAGACCCACCCAATCTTTGCCGTTGTCTCACCCTCTCCGACAACCACCTCGCTTGTGGCTTCGCTGACGGTACCGTCCGCCTCTTCGACCTGCAAACACGTGCCCACGTCATCACCTTCCGGTCCCACCACGATGACGTGTTGGGTCTTTTCTCGAGATCCGTGTCGGGGATTATCATCACAGATTCTACGCTGGTCTTTGCCACACTGGACGGAAACATCTACATCGCAGACATCAACGGGCCGCCCGATACCCACATAACCAGACCCGGTGCCATTCTGAGAAACGGCGTCTTGGTGGAGTTCGCCGGAAGTGGAAGGTGGTGGGTGGGCCTCTTCGCCGGCAGTCCGCATCAATCATTCCGTGTCTGGGACGCGCGCGGCGAGCAACCGGATTACACTGGCGGATCCTTGACAAACCCGTATTCCGTCCAGGGCTGGCACATGCTGACGGATATAACCGATCCGGTTGGCCGGTTGCGTGTCACCACTCGCGAGCTGGCCGTGGCATGCACGCGATCGAGGCTCGTAGTCTTCGATCTGAGGAACCCAGGGGTTTATTTGCGTGAGCTCGCGTCCAGAGTTGGCTTCATTGTGACCTCGCTGGACGTAAGCCACGAGACGTTGTTTATAGTGGAGAGGAGGGGCCGCGCTAGCGTGCGCCGGGCAAGCACGTTAGAGCCTCAATGTGAAGAATTTATGGTGGCGGCGGGACCGTCCCTGAGGGGGATGATCGGGTCCATGAACTTGGTCTATGTGCTAATATGCGCCGGTGGTGAAGTGAGATTGTGGAACGTGGAACTTGGAGCCGCGCATCTGCGTTTGACCATAAACGAAAGGGTCGGATTGGGTATGGCAATGGCTGCGAACGACAGAAACGTGGCGGTATCATGTAGAGACACGTCAATCCACCTCTGGGATTTTGGTGTACAGTAG 1383 0.5611 MASSSSSSPPPSSSPDDTAAAAPNNGGGSDPTGPSTSRRRRRRRPMNEVLPEPFLEALAIQIAIEASHSHGRLATAPSIANLFQVCSTWRAISRSDHLWQRLTRCIWRRPHRVRDTWHEEFIFWHRTDRNYVTGRYLYSSVHYNPAPFDVDPPNLCRCLTLSDNHLACGFADGTVRLFDLQTRAHVITFRSHHDDVLGLFSRSVSGIIITDSTLVFATLDGNIYIADINGPPDTHITRPGAILRNGVLVEFAGSGRWWVGLFAGSPHQSFRVWDARGEQPDYTGGSLTNPYSVQGWHMLTDITDPVGRLRVTTRELAVACTRSRLVVFDLRNPGVYLRELASRVGFIVTSLDVSHETLFIVERRGRASVRRASTLEPQCEEFMVAAGPSLRGMIGSMNLVYVLICAGGEVRLWNVELGAAHLRLTINERVGLGMAMAANDRNVAVSCRDTSIHLWDFGVQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02529 460 SUPERFAMILY F-box domain 75 129 IPR036047 GO:0005515
Accr4g02529 460 MobiDBLite consensus disorder prediction 1 47 - -
Accr4g02529 460 MobiDBLite consensus disorder prediction 1 20 - -
Accr4g02529 460 Gene3D - 45 132 - -
Accr4g02529 460 Gene3D - 152 458 IPR015943 GO:0005515
Accr4g02529 460 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 148 457 IPR011047 -
Accr4g02529 460 PANTHER WD40 REPEAT PROTEIN 12, 37 25 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02529 Accr-Chr4 50161583 50174628 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Accr4g02529 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02529 - - pcin:129302822 480.715