Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02528 ATGGGACGCTCTCGCGTTGCTGCGCGCCAGCCTGACGATGACCCCAGCCAAAGATCCAAGAGGAAAAAGGCAGCTTTCAATGCAGAGAATTCAGAAATTTTAAGTATAGGCCATGGAATAAATGAGGGGAAAGTATCTCTTTACCACTGTAATTATTGCAACAAAGATATTTCCAGGAAGATCCGCATTAAGTGTGCTGTTTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCGGTTGGAGCTGAGGTGACACCTCACAAAAGCAATCATCCGTATAGGGTTATGGATAATCTATCTTTTCCGTTGCTATGTCCAGACTGGAATGCAGATGAAGAGATGCTGCTTCTAGATGGCATTGCAATGTATGGATTTGGCAATTGGACTGAAGTAGCAGGATGTGTTGGAACAAAAAGCAAGTCAGAATGTATAGACCACTATAATGCTTTCTACATGAATTCACCATGCTTTCCTCTCCCTGATTTGTCTCGTGTTATGGGAAAGAGCAGAGAGGAGCTCCTTGCCATGGCCAAAGAGTTTGATGATGTTAAGAAAGAACTTTCTTCAAATGCAAAGCTTACCCTGAAAGAAGAGCCTCACTTTTCTGTGGGAATAAACTCAGAGGAATCTAAAATGGAAGAACCCGCTGATCAAACATTGTCTGGCTTAACTTCAGGTGCTAATATGGGCACAGTTCCTACCAAAGCTTATTCAAGTTCTTTTAAGAAGGCTTCCAATGCTAACCCAATTAACAACAGACTTAAAATGGAAGTGGAGACTCAAGCAGAGCGAAGCATTGGAGAGAAAAAACCTAAGTTAGCAGGGGAAGATGGACCTTCTGTGATGGAGTTGAGTGGATACAATTTTAAGAGAGAAGAATTTGAGATTGAATATGACAATGATGCAGAACAAGTATTAGCAGATATGGAATTTAAGGACACTGATACTGAATCTGAACGTTTATTGAAACTACAAGTGCTCCAAATATACTCAAAAAGGTTAGATGAAAGAAAGCGGAGAAAGGATTTTATCCTTGAAAGAAATTTGCTTTATGCTGACCCCTTTGAGAAATCTCTTACACCTGAAGAGAAACAAATGTGTCAGCACTATAGGGTTTTCATGCGGTTTCACTCTGAAGAAGAGCACAAGGAGTTTATCAAAAGTATTATTGAAGAACATCGTATTGTTAAGAGAATAAAAGATCTCCAGGAAGCTCGAGCTGCTGGTTGTCGACTGTCTGCCAATGCATATAGATTTATTGATCTCAAGAGGGCAGCTGAACAAAATGCCCCTGCCGCGTTACAGGCATTCTCAAGGTCCCTAGATGATTGGGATGTCTCTGGAATTACGGAGGCCGAGTTACTATCACAATCTGAGAAAGAGCTGTGTGATGAGATAAGAATTCTTCCGTCACACTATCTCAACATGTTGCAGACCATGACACAGGAAATTTCTAGGGGCAGTGTGACCAAGAAATCTGATGCATATATCTTGTTCAATGTAGAACCCAGCAAGGTTGATAGAGTTTACGATGTGCTTGTGAAAAAGGGGATTGCTCCAACTTGA 1566 0.4112 MGRSRVAARQPDDDPSQRSKRKKAAFNAENSEILSIGHGINEGKVSLYHCNYCNKDISRKIRIKCAVCQDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLLCPDWNADEEMLLLDGIAMYGFGNWTEVAGCVGTKSKSECIDHYNAFYMNSPCFPLPDLSRVMGKSREELLAMAKEFDDVKKELSSNAKLTLKEEPHFSVGINSEESKMEEPADQTLSGLTSGANMGTVPTKAYSSSFKKASNANPINNRLKMEVETQAERSIGEKKPKLAGEDGPSVMELSGYNFKREEFEIEYDNDAEQVLADMEFKDTDTESERLLKLQVLQIYSKRLDERKRRKDFILERNLLYADPFEKSLTPEEKQMCQHYRVFMRFHSEEEHKEFIKSIIEEHRIVKRIKDLQEARAAGCRLSANAYRFIDLKRAAEQNAPAALQAFSRSLDDWDVSGITEAELLSQSEKELCDEIRILPSHYLNMLQTMTQEISRGSVTKKSDAYILFNVEPSKVDRVYDVLVKKGIAPT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02528 521 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 48 516 - -
Accr4g02528 521 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Accr4g02528 521 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Accr4g02528 521 Gene3D - 42 96 IPR043145 -
Accr4g02528 521 FunFam Transcriptional adapter 2 436 520 - -
Accr4g02528 521 ProSiteProfiles SWIRM domain profile. 435 521 IPR007526 GO:0005515
Accr4g02528 521 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Accr4g02528 521 SMART sant 104 153 IPR001005 -
Accr4g02528 521 MobiDBLite consensus disorder prediction 1 24 - -
Accr4g02528 521 SUPERFAMILY RING/U-box 48 111 - -
Accr4g02528 521 PIRSF Txn_adaptor_ADA2 429 520 IPR016827 GO:0003713|GO:0006357|GO:0035065
Accr4g02528 521 PIRSF Txn_adaptor_ADA2 37 436 IPR016827 GO:0003713|GO:0006357|GO:0035065
Accr4g02528 521 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Accr4g02528 521 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Accr4g02528 521 Gene3D - 436 519 IPR036388 -
Accr4g02528 521 Gene3D - 103 153 - -
Accr4g02528 521 FunFam Transcriptional adapter 41 96 - -
Accr4g02528 521 CDD ZZ_ADA2 48 96 IPR041983 -
Accr4g02528 521 FunFam Transcriptional adapter 2 101 153 - -
Accr4g02528 521 SMART zz_5 44 89 IPR000433 GO:0008270
Accr4g02528 521 SUPERFAMILY Homeodomain-like 438 518 IPR009057 -
Accr4g02528 521 CDD SANT 108 148 IPR001005 -
Accr4g02528 521 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Accr4g02528 521 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02528 Accr-Chr4 50097082 50135484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02528 1 519 EF-hand Containing Proteins AT3G07740 51.845 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr4g02528 Myb_DNA-binding 9.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02528 K11314 - gmx:100779424 726.857