Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02487 ATGAAAGTTGCAGAACTCCAGTTTCAGCTTCATCACACCCATCATCATCAACACCAACAGCAGAAGCAGAACAAGCAGAACGAGACCGCCCAGATGTGTAGGAAGATCCAATTGTCTGTTGCCGACCAACTTTCTCCGCCAATCCGCTCCGACTCCGCCGATGACTGTGACATGGCAGACGAGGGCGAGGAGTTCTTCGTTCCGCCACTCAATTTCGCTGTGGTGGATAACGGCATTTTCAGGTCTGGCTTCCCTGAGCCCGCCAATTTCCCCTTCCTGCAAACCCTCGGCCTTCGTTCCATCATATATCTATGTCCTGAGCCGTACCCGGAAGCAAACATGGAGTTTCTGAGATCAAATGGGATTAAGCTTTATCAATTTGGGATCGAAGGTCGCAAGGAGCCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCACTGAAAGTTGTTCTAGATGTGAAAAACCATCCGGTTTTAATTCACTGTAAGCGGGGAAAGCACCGAACAGGTTGTCTTGTGGGATGCTTGAGAAAGCTGCAAAAATGGTGCTTATCATCGGTGTTCGATGAGTACCAGCGATTTGCGGCTGCCAAAGCGAGAGTTTCTGACCAGAGATTTATTGAGCTGTTTGACATTTCCGGCCTGAAGCATTTGCCCATGTCATTCTCATGTTCAAAGAGGATAAGGTGA 693 0.4863 MKVAELQFQLHHTHHHQHQQQKQNKQNETAQMCRKIQLSVADQLSPPIRSDSADDCDMADEGEEFFVPPLNFAVVDNGIFRSGFPEPANFPFLQTLGLRSIIYLCPEPYPEANMEFLRSNGIKLYQFGIEGRKEPFVNIPEDTIREALKVVLDVKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPMSFSCSKRIR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02487 230 CDD PFA-DSP_Siw14 66 212 - -
Accr4g02487 230 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 66 213 IPR029021 -
Accr4g02487 230 ProSitePatterns Tyrosine specific protein phosphatases active site. 161 171 IPR016130 GO:0016311|GO:0016791
Accr4g02487 230 ProSiteProfiles Dual specificity protein phosphatase domain profile. 71 225 IPR020422 GO:0006470|GO:0008138
Accr4g02487 230 FunFam probable tyrosine-protein phosphatase At1g05000 65 215 - -
Accr4g02487 230 Pfam Tyrosine phosphatase family 67 217 IPR004861 -
Accr4g02487 230 PRINTS Plant and fungal dual specificity phosphatase signature 103 116 IPR020428 GO:0016791
Accr4g02487 230 PRINTS Plant and fungal dual specificity phosphatase signature 66 83 IPR020428 GO:0016791
Accr4g02487 230 PRINTS Plant and fungal dual specificity phosphatase signature 139 153 IPR020428 GO:0016791
Accr4g02487 230 PRINTS Plant and fungal dual specificity phosphatase signature 122 136 IPR020428 GO:0016791
Accr4g02487 230 MobiDBLite consensus disorder prediction 10 30 - -
Accr4g02487 230 Gene3D Protein tyrosine phosphatase superfamily 65 215 IPR029021 -
Accr4g02487 230 PANTHER TYROSINE-PROTEIN PHOSPHATASE 31 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02487 Accr-Chr4 48177136 48179529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02487 62 228 Protein tyrosine phosphatase (PTP) family AT4G03960 78.443 1.30e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02487 K18045 - gmx:100799968 344.354