Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr4g02479 | ATGATGAATTTTCAAATCTACACTCTGTCAGCCTTGTGTAGCAGCAGCAGCTGCAGCAATGCCGAAGGTGCTAGGGAGATCCTGGTGCAACACTTGCTTGTTAAAGAAGATGACCAGAAGCTACCATTGGATCTTCAGCCGATAACCTCATCAGGTGAGGACTTGAGTGATGTTGCTGTAGAATACTCATTATGCCCATCCAAAGAAGGAGGAGCAATGCTAGGGTGTGTGAAAAGAGGAGAAATGAAAACATATCAACAATATTTGGCTGCAAAACAGCTAAAGAAGCAGTCTTGGAGATGTCACAGAAGATATAACACTTGGTTTCAATGA | 333 | 0.4294 | MMNFQIYTLSALCSSSSCSNAEGAREILVQHLLVKEDDQKLPLDLQPITSSGEDLSDVAVEYSLCPSKEGGAMLGCVKRGEMKTYQQYLAAKQLKKQSWRCHRRYNTWFQ | 110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr4g02479 | 110 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 8 | 82 | - | - | |
| Accr4g02479 | 110 | Pfam | NOT2 / NOT3 / NOT5 family | 83 | 110 | IPR007282 | GO:0006355 | |
| Accr4g02479 | 110 | Gene3D | - | 62 | 110 | IPR038635 | - | |
| Accr4g02479 | 110 | SUPERFAMILY | FKBP-like | 25 | 84 | - | - | |
| Accr4g02479 | 110 | ProSiteProfiles | PpiC-type peptidyl-prolyl cis-trans isomerase family profile. | 24 | 82 | IPR000297 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr4g02479 | Accr-Chr4 | 47642931 | 47643709 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr4g02479 | 25 | 106 | Sulfurtransferasese or Rhodanese | AT5G19370 | 47.561 | 5.30e-17 | 72.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr4g02479 | - | K13412 | qsu:112039570 | 99.7525 |