Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02472 ATGGAGAACGCAGGGCTTCCTTTCCCAGCCGGAGAACAGGTTCTTACATTGATGGCTAACGCTATCGAACCCATCCAAAAAGAAGAAAAGCAAATGGAGAAATCTCCATTAGAGATAAATGAACCCCAAATGATCAAACCCACCATCTCTGAGTTCAGTGGGAAGGACACAGATGCACACTTGGAAAATGTGATTGCTAGCTTTCTTGACACTATAACTCACAGAAGATATCGCTGCTTAGGGTATCCCGTCAACCAAGACTTTAACTATGATGCGTTGGTACAGTTGCTACGTTTCTTCTTGAACAATATGGGTGATCCATTTATAGGGAGTAGCTTCTCTCTTAACTCACATCCGTTTGAGCTGTGTGTACTTGATTGGTTTGCCAAACTTTGGGACATAAAGAACAATGAGTATTGGGGATATGTTACAAATTGTGGAACTGAAGGAAATTTGCATGGGATTTTAGTAGGGAGGGAACTACTTCCCGATGGAATTATTTACACATCACGAGACTCTCATTATTCAGTTTTAAAAGCAGCAAGACTTTTTAGAATCAAGTGTGTGGTAGTTGGGACTCTAATCTCTGGTGAGATTGACTATAATGAACTGAAAGCTTCAATTCTTGAGAACAAGGACAAGCCAGCCATCATCAATCTAACCCTAGGGACAACTATAAAAGGAGGCATTGATGATGTTGATCTTGTGCTACAAATACTTGAAGAATGCGGTTTTAGTGAAGATCGGTTCTACATTCATTGTGATGCAGCTTTATTTGGACTGATGCTCCCATTTATTAATGGGGCACCAAAGATTACTTTCAAGAAACCTATTGGAAGTGTAACTGTCTCATGCCATAAGTTTCTCGGATGTCCTATCCCTTGTAGCATCATAATAACACGTTTAAAATACGTAGACCTCCTATCTAAAGAAGTTGAATACATCTCTTCAAGAGACACCACTATCTCTGGGAGCCGAGGAGGTCATGCATCCATCTTTCTTTGGTATGCTCTCAACAAGAAAGGCTTCAACGGCCTCCAAAAAGAAGTTGAAGAGTGCAACAAGAAGGCGATTTACCTTCGAAACTGCTTGAGAGGACAAGGCATTGGATCCATGCTGAACAAGTTTAGCAACATCGTGGTGTTCGAGAGGCCTCTAGATGATGCATTCTCTCTTAAGTGGAGCTTGTCTAATGAAGGGAATCTATCTCATGTGATAGTGATGCAACACATCTCTGTGAAAATGTTGGATTCCTTTGTGAGTGAGTTTGCGAAGAATCGATCGATTTGGTACAAAGATAGTAGCAGCAAGAAGCCTCCTTGTATTGGTGAGGAGATTGGTGCTAAGAACTGTGCTTGTTTAGTCCACAAGAAGCTGATATCGTTTTGA 1389 0.4111 MENAGLPFPAGEQVLTLMANAIEPIQKEEKQMEKSPLEINEPQMIKPTISEFSGKDTDAHLENVIASFLDTITHRRYRCLGYPVNQDFNYDALVQLLRFFLNNMGDPFIGSSFSLNSHPFELCVLDWFAKLWDIKNNEYWGYVTNCGTEGNLHGILVGRELLPDGIIYTSRDSHYSVLKAARLFRIKCVVVGTLISGEIDYNELKASILENKDKPAIINLTLGTTIKGGIDDVDLVLQILEECGFSEDRFYIHCDAALFGLMLPFINGAPKITFKKPIGSVTVSCHKFLGCPIPCSIIITRLKYVDLLSKEVEYISSRDTTISGSRGGHASIFLWYALNKKGFNGLQKEVEECNKKAIYLRNCLRGQGIGSMLNKFSNIVVFERPLDDAFSLKWSLSNEGNLSHVIVMQHISVKMLDSFVSEFAKNRSIWYKDSSSKKPPCIGEEIGAKNCACLVHKKLISF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02472 462 PANTHER - 27 457 - -
Accr4g02472 462 SUPERFAMILY PLP-dependent transferases 37 425 IPR015424 -
Accr4g02472 462 Gene3D - 112 327 IPR015421 GO:0003824
Accr4g02472 462 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 280 301 IPR021115 GO:0016831
Accr4g02472 462 Pfam Pyridoxal-dependent decarboxylase conserved domain 166 368 IPR002129 GO:0016830|GO:0019752|GO:0030170
Accr4g02472 462 Gene3D Aspartate Aminotransferase, domain 1 331 427 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02472 Accr-Chr4 47346588 47349380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02472 222 406 Calmodulin-binding Proteins AT2G02010 28.205 2.41e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02472 K25193 - gmx:100784867 560.066