Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02459 ATGGCACTTAATGCTCACGAAGCAGCGTACCCTTTAGGGTCTTCTGGTTCAACTAGGAGATGGAAGTATCATGTATTCTTAAGTTTCCGAGGAGAAGACACTCGTAAAAGTTTTACAGATCATTTGTATCATGCTTTGCAACGTAAGGGAATCATAGCTTTTAGGGATGATGAAGAACTTGAGAGGGGACATTTTATTAAACCAAGTTTGCTTCAAGCAATTGAAGAATCACTTACTACTATTGTTGTTCTATCTGCAAATTTTGCTTCTTCATCTTGGTGCTTGGACGAGCTATTAAAGATTCTTCATTCTCAGAAACAAACAGGTTTATTGGTATTTCCAATCTTTTATGGTGTGGATCCGTCTGATATTCGACATCAAACAGGAAATATTGGAAAAGCATTCGAAAAAGTTGAAGCAAAATTCACACAAGACAAAATGAAGGTGCAAAGATGGAGGGATGCTTTAGAAGAAGTTGCCAACTTATCTGGCTGGCACTCTGACAATTGGCATGAAACAGAACTCATTGAAACTGCAGTAGAAGAAGTGTGGTCAAAATTATATGATCAACTTCCATTTGACTCAGAGAAATTAGTTGGAATTGAATCAAAACTAGCAGAATTAGATTCATTCATAGCAAATGGAATGGATGGAGTTCAATTTGTAGGAATATGGGGCACAGGAGGCTTGGGTAAAACTAGACTTGCTAGAGCTTTTTACGAGAGAATGCACAAAAAATTTGATGGTCATTGCTTTCTTCACAATGTTAGAGAAGTATCTAAAACAGATGGTTTGATTTCCTTGCAAAAAAAACTTCTTTTTTCTCTGCATAAAAGAAGTATCGATGTGTGTGACTATTATGAAGGAAGGAAGTTGATAAAAAACATGTTGTGCAATAGAAAAGTCCTACTCGTCCTCGATGATGTGAGTGAAATAAGCCAACTTCAGAACTTGGCAGGGGAACAAGGATGGTTTGGTGAAGGGAGCATAATATTAGTAACAACTAGAGATAAACATGTGTTATTATCAAATGGTGTATCTACTCAATATGAGATGAAATTCTTAAGTGATGATGAGTCCCTTGAACTTTACCATCAAAATGCTTTTAAAGGAAGAAAGCCAAACAAAGATTACTTTGAACTTTCTAGAACTGTGATTCAATATGCTCAAGGTCTTCCTCTGGTGCTCAAAGTGTTGGGTTCATTTCTTTGTGGACGAAGTATATTAGAATGGAAAGATGCAATAGCTAAGTTCAGGAAAGTTCTTCCGAATGATGTCTTGAAGATACTTCAAGTGAGTTTTGATGGATTAGAAAACGATGAGAAGAATATTTTTTTAGATATTGCTTGCTTTTTTAATGGGAAGCAGAAAGATTTTGTCATTCAAATGTTACAATATTTGGATCTTCACCCAATAATTGGAATAAAAGTTCTTATTGATAAATCATTGGTAACTGATGATGGATCGATTTTGAGGGTGCATGACATCCTTCAAGAAATGGGTATGAATATTGTTTTTCAAGAATCATTCAATGATGTTGGCAAGCGTAGTAGGATATGGTCCTTAGAAGACGCTAACTATGTACTAGAAAGAAATATGGGAACAGAAGCAATCCGAGGTATAGTATTAAGATTAGACACAGAATGTGTGTCATATTGGGATCCTCAAGCCTTCTTAAAGATGAGTAATCTTAAATTACTTATCATAACAAGTTCTTCACCTGATCCCCATTCTTCTTTGAATCTTCCTTATGGACTTGAATGCTTTTCAAGTGCATTAAAAGTCCTACAATGGAAGGAGTGCTGTTTAGATGCTCTGCCAAGTCATGTTCCATGTGAACTCATTGATCGTAAAACCAAACCTAGCCCATTAAAACAACTATGGCAAGGATCACAGGTTTTTGAAAGGCTTAAATTTATGGATTTAAGCTATTCAAGATATCTAATCAAGACACCAAATTTTGATGAAATTCCTGATCTTCAAAAACTCATTCTTAAAGGCTGTTTAAACCTTGTTGAAGTACATCCATCTCTTGGGCACCATCAAAACCTTGTCATGGTCAATTTGAAGGGTTGTAAGAGTATCAAAACTCTTCCAAGTAAGTTTGAGATGAAATGCCTAGAGACTCTTGTACTGTCAGGTTGCTTCAAAATTAGACAACTTCCAGAATTTGGGCAAAGCATGAAATGTCTAACCAAACTTGATGTAGAGGAGACTGACATCACAAAACTACCTCAATCACTCATCAATTTGTGTCAGCTTGTTGTTTTAAATCTAAAGAATTGCAAAAATCTGGTATGCCTTCCAAATGTAATTCAATTTTTGAAGTGTATTAAAATTCTCAATATTTCTGGTTGCCCAAAACTCTCAAGACTACCAGAGAATCTGAATGAAAATGTAGCTTTGGAGGAGCTTGATGCTAGTGGAACTGCTATAAAGGAAGTGCCTTCATCAATAGTTCATTTGAAAAATTTAAGATCCCTATCTTTTAGTGGATGCAGCGGGCAAGCACAATCATCCTCACCAAATTTCTCTTCTTTTTGGACTAGATTTTTTAGGCTTACAAGGCCTTCAATAATACACTCAGGCTTATCGCTACCCCCTTCTTTATCAGGTTTATCAAATTTGAAGAAGTTAAATCTAAGTTATTGCAATCTCTCTGATGAGTCTGTTGCAAATGATATTAATGATTTATCATCATTGGAGCATCTTGATCTAAGAGGAAACAATTTTGTTAACCTACCTGTTGGCTTCTTCTCAAATCTTTTGAAGCTTTATCGTGTTGACTTGGATCATTGCACAAGGCTTCAGTCATTTCCAAGACTTCCATCAAATTTAATCGCTATGCTGGCAATTGATTGTCCTTCAATGAAATATATATTAGATTCCCAACAGCTGTGGAAGATCTTTGAACAATTTGAATATCAGGAGAGAGAGTTGTTACCAAAGGAATATATGTTCCATCGGTGCTTAGATCATATGCTTCCTGTTATTATGAATATTGGAGGAAGCGAAGTGCCATCATGGTTTCACAATCAAAATTACTTTTGTGATGACGCTTGGTATTATCAGCCAAATGTGTCATTTATAACGGACATACAGGGTCATCGTCATTCAAGCAAACTGTTGGGAATAGCTGTATGCTTAGTTATAGAAGGTCATTATAGTGCATCTACTTCTTATGCTGAAAGTGCTTCTGTGTGGTGGATTTGTAGAAATCATGAAATTCCAACTCAACAAACAGGTCCAATTCAACGAGCAGGCTACGCCATTCATAAACACAATAATGATTGTAACCAACGTTTTTTATTCTTTTTCAAATGTGTCGGTAGTAAGAAAAGACTTCAATTTAGTTTTTATGCCGAAAATAGAAGCACGAAAGTAAATTTTGAAATAAAGAAGTGCGGGTGGAATGTATTGTGTAAAGAAGATATCGAAGCATGGCGAAGAGCAAGTGGTCAAGGCTGTAGCAGCAGCAATAAATGTTCAGACAACTACCATAATTATAATGAATTGGGAGCAACAGAAGCAACAAGTGACAACTTAGGCAATTCTCAATCCATTAATGGCAGTGAAGAAGAAGATGGACAGTCTAATGTTGATGTAGACATCCAGATGCCTCTGACAAAACGCAGAAAACTATGA 3645 0.3599 MALNAHEAAYPLGSSGSTRRWKYHVFLSFRGEDTRKSFTDHLYHALQRKGIIAFRDDEELERGHFIKPSLLQAIEESLTTIVVLSANFASSSWCLDELLKILHSQKQTGLLVFPIFYGVDPSDIRHQTGNIGKAFEKVEAKFTQDKMKVQRWRDALEEVANLSGWHSDNWHETELIETAVEEVWSKLYDQLPFDSEKLVGIESKLAELDSFIANGMDGVQFVGIWGTGGLGKTRLARAFYERMHKKFDGHCFLHNVREVSKTDGLISLQKKLLFSLHKRSIDVCDYYEGRKLIKNMLCNRKVLLVLDDVSEISQLQNLAGEQGWFGEGSIILVTTRDKHVLLSNGVSTQYEMKFLSDDESLELYHQNAFKGRKPNKDYFELSRTVIQYAQGLPLVLKVLGSFLCGRSILEWKDAIAKFRKVLPNDVLKILQVSFDGLENDEKNIFLDIACFFNGKQKDFVIQMLQYLDLHPIIGIKVLIDKSLVTDDGSILRVHDILQEMGMNIVFQESFNDVGKRSRIWSLEDANYVLERNMGTEAIRGIVLRLDTECVSYWDPQAFLKMSNLKLLIITSSSPDPHSSLNLPYGLECFSSALKVLQWKECCLDALPSHVPCELIDRKTKPSPLKQLWQGSQVFERLKFMDLSYSRYLIKTPNFDEIPDLQKLILKGCLNLVEVHPSLGHHQNLVMVNLKGCKSIKTLPSKFEMKCLETLVLSGCFKIRQLPEFGQSMKCLTKLDVEETDITKLPQSLINLCQLVVLNLKNCKNLVCLPNVIQFLKCIKILNISGCPKLSRLPENLNENVALEELDASGTAIKEVPSSIVHLKNLRSLSFSGCSGQAQSSSPNFSSFWTRFFRLTRPSIIHSGLSLPPSLSGLSNLKKLNLSYCNLSDESVANDINDLSSLEHLDLRGNNFVNLPVGFFSNLLKLYRVDLDHCTRLQSFPRLPSNLIAMLAIDCPSMKYILDSQQLWKIFEQFEYQERELLPKEYMFHRCLDHMLPVIMNIGGSEVPSWFHNQNYFCDDAWYYQPNVSFITDIQGHRHSSKLLGIAVCLVIEGHYSASTSYAESASVWWICRNHEIPTQQTGPIQRAGYAIHKHNNDCNQRFLFFFKCVGSKKRLQFSFYAENRSTKVNFEIKKCGWNVLCKEDIEAWRRASGQGCSSSNKCSDNYHNYNELGATEATSDNLGNSQSINGSEEEDGQSNVDVDIQMPLTKRRKL 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02459 1214 PRINTS Disease resistance protein signature 389 403 - -
Accr4g02459 1214 PRINTS Disease resistance protein signature 296 310 - -
Accr4g02459 1214 PRINTS Disease resistance protein signature 749 765 - -
Accr4g02459 1214 PRINTS Disease resistance protein signature 221 236 - -
Accr4g02459 1214 MobiDBLite consensus disorder prediction 1177 1214 - -
Accr4g02459 1214 SMART till_3 22 162 IPR000157 GO:0007165
Accr4g02459 1214 Gene3D - 188 348 IPR027417 -
Accr4g02459 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 448 IPR027417 -
Accr4g02459 1214 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Accr4g02459 1214 ProSiteProfiles TIR domain profile. 21 191 IPR000157 GO:0007165
Accr4g02459 1214 SUPERFAMILY L domain-like 705 949 - -
Accr4g02459 1214 Gene3D Ribonuclease Inhibitor 539 720 IPR032675 -
Accr4g02459 1214 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 723 IPR044974 GO:0006952
Accr4g02459 1214 Gene3D Ribonuclease Inhibitor 721 959 IPR032675 -
Accr4g02459 1214 Gene3D - 354 438 IPR042197 -
Accr4g02459 1214 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Accr4g02459 1214 SUPERFAMILY L domain-like 593 725 - -
Accr4g02459 1214 Pfam NB-ARC domain 216 420 IPR002182 GO:0043531
Accr4g02459 1214 MobiDBLite consensus disorder prediction 1177 1195 - -
Accr4g02459 1214 SUPERFAMILY "Winged helix" DNA-binding domain 425 529 IPR036390 -
Accr4g02459 1214 Pfam TIR domain 22 192 IPR000157 GO:0007165
Accr4g02459 1214 SMART LRR_typ_2 898 921 IPR003591 -
Accr4g02459 1214 SMART LRR_typ_2 728 751 IPR003591 -
Accr4g02459 1214 SMART LRR_typ_2 873 897 IPR003591 -
Accr4g02459 1214 Gene3D - 17 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02459 Accr-Chr4 46486784 46490957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02459 753 929 WRKY Transcription Factor Family AT4G12020 31.844 2.83e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02459 - - pcin:129318967 1057.36