Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02379 ATGGTTCAGTGGCTCAAATATCGTGGGCGTCATAGCTACGCTACTAAATCCAATCATCACAGGGTCGTCAAAAGCCCTGGTGGCAAGTTGCTGTATCAGACTACAAAGAAGAGAGCTAGTGGGCCAAAGTACCTTGTAACTGGGAAGAGGATCCAAGGGATTCCACACTTGAGACTTGATGAATACAAGAGGTCTAGATTGTCTAGGAATCGTCGAACAGTTAACCGGGCTTATGGAGGTGTGTTATCGGGAGGCGCTTTGAGAGAAAGGATAATCCAGGCGTTCTTGGTTGAAGAGCAAAAATTTGTGAAAAAGGTATTGAAGATCCAGAAGACAAAAGAAAAGCAAGCATCAAGGAGTTAA 363 0.4435 MVQWLKYRGRHSYATKSNHHRVVKSPGGKLLYQTTKKRASGPKYLVTGKRIQGIPHLRLDEYKRSRLSRNRRTVNRAYGGVLSGGALRERIIQAFLVEEQKFVKKVLKIQKTKEKQASRS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02379 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Accr4g02379 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Accr4g02379 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Accr4g02379 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Accr4g02379 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 116 IPR008195 GO:0003735|GO:0005840|GO:0006412
Accr4g02379 120 Gene3D - 39 120 - -
Accr4g02379 120 Gene3D - 1 38 - -
Accr4g02379 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02379 Accr-Chr4 40648769 40649131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02379 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 83.193 5.22e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02379 K02915 - jre:108988800 204.912