Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr4g02377 | ATGAACAACAATCTGGCATTTCTTGCAAGAACTGTTGCAACAAAGTTTCAAAGTCCATCTCCATTGCGAATCTATTGTTCATCATCCTCAGAGTCTTCTCCTCCTTCCAGCAATAAACTCTTTGTTGGAGGGTTGTCATGGTCCGTGGGTGAGAAAACCCTCAAAGATGCTTTCTCTTCATTTGGTGAAGTCACTGAAGTGAGGATAGCATATGATAAAGACAGTGGTAGGTCTAGGGGGTTTGGCTTTGTCATATTTTTAGATGAAGATAATGCCAAAACTGCAAAAGACGCAATGGATGGCAAGGCACTCTTAGGAAGACCCTTGAGAATAAATTTTGCTCTTGAGACGGTCCGTGGAGGGCCTGTTGTAGTTCCTCGGATCTCAGATATGGGACACATAAATAGACGTAGGACTTGA | 420 | 0.4286 | MNNNLAFLARTVATKFQSPSPLRIYCSSSSESSPPSSNKLFVGGLSWSVGEKTLKDAFSSFGEVTEVRIAYDKDSGRSRGFGFVIFLDEDNAKTAKDAMDGKALLGRPLRINFALETVRGGPVVVPRISDMGHINRRRT | 139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr4g02377 | 139 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 15 | 117 | - | - | |
Accr4g02377 | 139 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 40 | 110 | IPR000504 | GO:0003723 | |
Accr4g02377 | 139 | SMART | rrm1_1 | 39 | 112 | IPR000504 | GO:0003723 | |
Accr4g02377 | 139 | Gene3D | - | 25 | 137 | IPR012677 | - | |
Accr4g02377 | 139 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 38 | 116 | IPR000504 | GO:0003723 | |
Accr4g02377 | 139 | SUPERFAMILY | RNA-binding domain, RBD | 27 | 120 | IPR035979 | GO:0003676 | |
Accr4g02377 | 139 | CDD | RRM2_NsCP33_like | 39 | 114 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr4g02377 | Accr-Chr4 | 40612201 | 40614534 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr4g02377 | 36 | 95 | C2H2 Transcription Factor Family | AT2G19380 | 40.000 | 4.31e-12 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr4g02377 | - | - | cave:132182736 | 194.126 |