Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02374 ATGTCCGTCTCCACCATAAATCTTACACGTTTGGGAATACAAGGTACACTTAACAATCTTAACTTCTCGACCTTCACAAAGCTCCAAGTTTTAGATACAAGTTACAACAAGTTTTCTGGAACTATTCCCAGCCAATTTGGCAACTTGTCCAGTGTATTTTCATTGTATTTGGATAATAATTTCTTGAGTGGTTTCATCCCTCAAGAAATAGGAAAGTTGACTACTCTAAATCTCCTCTACCTCGACCAAAACTCTCTTTTTGGACCTATTCCATCTACCATAGGAGACCTCACAAATCTTACCACACTGAGTTTGAGGGAAAACAATCTTTGGGGATCAATCCCATCGTTTGTGGGAAACTTGGTCAATTTACAAGTTCTCTCCCTGGATAGTAACTCTCTTTCTGGATCTATTCCAGCTACTATAGGAAACTTGAAACACCTCATGTTCCTAGAATTAAGATGGAACAAACTCAATGGGAGCATTCCAATAGAGATGAGTAATCTTACCAACTTGAATAGTTTACAAATTGGTGGGAATGAGTTGACTGGCCATTTACCACAACATATTTGCTTTGGTAGATCATTTGAATATTTATATGCTCCTCAAAAAAAATTCAATGGTCCAATTCCAAGAACCTTGAAAAATTGCTCTAGCCTTATCAGGCTCACACTCTATGATAACCAATTGGTTGGCAACATATCAAGTGATTTTGGTGTGTATCCACACTTGAAATACATTGATTTGAGTGGAAATAAATTTTATGACCACATTTCAACATTGTTGGGAAAGTGTCGCAATCTTACAACACTTAAGATTTCCAACAACAATCTTTCTGGTAGTATAACTCCGGAAGTAGTAGAGGCAACCAATCTTGGGGAACTCAATGTTTCTTCAAATCACTTGACAGGAGAAATTCCAAGAGAATTAGGAAAGTTGATCTCATTGACAAGACTTTCTCTAAGTCATAATCAATTTTCAGGCAAGATTCCCATAGAAATAGGATTTTTGAATCAACTTGAGAAATTGGACTTGACAGCAAATAATCTCATTGGGCAAATACCTAAAGAGTTTGAAGGCTTACGTACTCTATGGCTCTTGAACTTGAGCAAAAATAAATTTGAGGGAACCATTCCCTTCGAGATTGGTCAGTTACAAGCTTTGCAAGAACTTGACCTTAGTGAAAATATGTTGAGTGGAAAAATACCTGCAACACTTGGAGCATTAAAAATGTTGGAAATTTTAAACCTTTCACATAATAATCTCTCTGGCACTATGTCATCTGTTTTTGATGACATGTCAAGTTTGACATCTGTTGACATATCGTACAATCATTTAGAGGGCTCTCTTCCCAATATTCCAGGCTTTCAAAGTATTACATTTGAGGCAGTGAGGAACAACACAAATTTATGTGGTAATGTTACTGGTTTAGAGCATTGCAACAAACATAGCAATGACCCACAAGGTCGCATGAACAAAAAAGAAAAGCTATTAGTTGCACTGTTGCTTGTTTGTTTTGTGACCCTAATGTTAGCAGTAGGTGGAATCTCCTATATTCTTATTCAAAAATCAAAGAGAACAAAAGGTCACAATGGAGAAGATCTAACTCTCAATATTTTCTCCATGGGGTGTTTTGGTAGGGAAATGTTGCATCAAAAAGTTGTTGAAGTTACGGAGGGTTTTAATGACAAATATCTCATTGGGGTTGGAGCACAAGGAAGTGTTTACAAAGCTGAGTTACTTGATGGTCAATTTTTTGCTGTGAAGAAACTTCATCACAATTGCAATACAAATTTCTCCAATAATGATAAAGCTTTTTTTAGTGAAATTCAAGCTTTAACAGAGATCAAACATCGTAATGTAGTGAAATTACTTGGGTTTTTCTCAAATTCACACCTATCATTCCTTGTGTATGAGTTCTTAGAAGGTGGTAGCTTGGATAAGATTTTGAAAAATGATATACAAGCATCTAAACTTGATTGGAATAAGAGGGTGATTGTTGTTAGAGGTGTGGTTGATGCATTATTCCATATGCACTGTGGTCTCTCATGTCCCATAATTCATCGTGACATATCAAGCAAGAATATCTTGTTGGATTCAGAATATCAAGAAGCTCATATCATTGACTATGGAATATCCAAGTTTCTAAAGATTGACTCGAACAATATGACCTCATTTGCTGGCTCTTATGGCTATGTTACTCCTGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGCGATGTTTATAGTTTTGGTGTTCTCACATTAGAAATTTTAATGGGAAGACATCCGGGAGAGTTCATTTATTCTTTGACAGAGATTCAAACATCTTATGATTTGTCACTAAAGGATGTGTTGGATAAGCGACTTCCTCGACCCACAAACCAAGTTGTTAAGGAAGTAATGTTGATTGTGAAAATTGCACTTGCATGCTTGAGTGAAAATCTTCAATGCCGGCCAACCATGGAACAAGTATCTCTGAAACTTTCTAGGCCTAAACCTTATTCAGTGAATCAATTTGACAACATCACACTTGGACAACTCATGGAAGCTTAA 2559 0.3634 MSVSTINLTRLGIQGTLNNLNFSTFTKLQVLDTSYNKFSGTIPSQFGNLSSVFSLYLDNNFLSGFIPQEIGKLTTLNLLYLDQNSLFGPIPSTIGDLTNLTTLSLRENNLWGSIPSFVGNLVNLQVLSLDSNSLSGSIPATIGNLKHLMFLELRWNKLNGSIPIEMSNLTNLNSLQIGGNELTGHLPQHICFGRSFEYLYAPQKKFNGPIPRTLKNCSSLIRLTLYDNQLVGNISSDFGVYPHLKYIDLSGNKFYDHISTLLGKCRNLTTLKISNNNLSGSITPEVVEATNLGELNVSSNHLTGEIPRELGKLISLTRLSLSHNQFSGKIPIEIGFLNQLEKLDLTANNLIGQIPKEFEGLRTLWLLNLSKNKFEGTIPFEIGQLQALQELDLSENMLSGKIPATLGALKMLEILNLSHNNLSGTMSSVFDDMSSLTSVDISYNHLEGSLPNIPGFQSITFEAVRNNTNLCGNVTGLEHCNKHSNDPQGRMNKKEKLLVALLLVCFVTLMLAVGGISYILIQKSKRTKGHNGEDLTLNIFSMGCFGREMLHQKVVEVTEGFNDKYLIGVGAQGSVYKAELLDGQFFAVKKLHHNCNTNFSNNDKAFFSEIQALTEIKHRNVVKLLGFFSNSHLSFLVYEFLEGGSLDKILKNDIQASKLDWNKRVIVVRGVVDALFHMHCGLSCPIIHRDISSKNILLDSEYQEAHIIDYGISKFLKIDSNNMTSFAGSYGYVTPEIAFTMQANEKCDVYSFGVLTLEILMGRHPGEFIYSLTEIQTSYDLSLKDVLDKRLPRPTNQVVKEVMLIVKIALACLSENLQCRPTMEQVSLKLSRPKPYSVNQFDNITLGQLMEA 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02374 852 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 171 484 - -
Accr4g02374 852 SUPERFAMILY RNI-like 6 303 - -
Accr4g02374 852 SUPERFAMILY Protein kinase-like (PK-like) 548 828 IPR011009 -
Accr4g02374 852 Gene3D Ribonuclease Inhibitor 288 356 IPR032675 -
Accr4g02374 852 ProSitePatterns Tyrosine protein kinases specific active-site signature. 686 698 IPR008266 GO:0004672|GO:0006468
Accr4g02374 852 ProSiteProfiles Protein kinase domain profile. 561 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02374 852 Gene3D Transferase(Phosphotransferase) domain 1 641 843 - -
Accr4g02374 852 SMART LRR_typ_2 25 48 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 121 145 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 49 73 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 313 335 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 433 456 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 97 119 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 385 408 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 409 432 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 169 193 IPR003591 -
Accr4g02374 852 SMART LRR_typ_2 337 360 IPR003591 -
Accr4g02374 852 FunFam leucine-rich repeat receptor protein kinase EMS1 23 170 - -
Accr4g02374 852 Pfam Protein kinase domain 562 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02374 852 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Accr4g02374 852 Pfam Leucine rich repeat 266 326 IPR001611 GO:0005515
Accr4g02374 852 Pfam Leucine rich repeat 27 86 IPR001611 GO:0005515
Accr4g02374 852 Gene3D Ribonuclease Inhibitor 194 287 IPR032675 -
Accr4g02374 852 SUPERFAMILY L domain-like 202 472 - -
Accr4g02374 852 FunFam Leucine-rich repeat receptor protein kinase MSP1 523 640 - -
Accr4g02374 852 PRINTS Leucine-rich repeat signature 409 422 - -
Accr4g02374 852 PRINTS Leucine-rich repeat signature 388 401 - -
Accr4g02374 852 PANTHER LEUCINE RICH REPEAT KINASE 2 93 835 - -
Accr4g02374 852 Gene3D Ribonuclease Inhibitor 357 481 IPR032675 -
Accr4g02374 852 Gene3D Ribonuclease Inhibitor 1 193 IPR032675 -
Accr4g02374 852 Gene3D Phosphorylase Kinase; domain 1 524 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02374 Accr-Chr4 40468791 40471439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02374 25 739 Receptor kinase-like Gene Family AT4G08850 41.495 5.39e-178 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02374 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02374 - - pcin:129317259 987.252