Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02370 ATGGATCAGCCCCCATCCTCTGCCGGTAGACGCAGCTTGAAGCGCAATCGCAAACAAGAATTCGCGGAAGAAGGAGCAGTTCATCCTACCACGGATTGTAAAGTGTTGGCTCTCGAACCTCAACAATCTCATCAAGATCTGTTGAGTGAAGTTGTGGCGCAAGTCACTATTCTCAACTCCAGTTTATCATCGTCTCAGTCGGATCGCCTCACGGCCAAGCGCGCTGCTCATCTTCTCTCTGAACTCGCCGAGAATGAGTTAATTGTGGACAGTATAGTGGACTGCGGAGCCGTTCCTGCTTTGTTACAACATCTGAAAGCTCCTGAACCAGGTGTTACCAAGCCTTACGAGCATGAGGTGGAACAGGGATGCCTCTTGATCCTCGCCCTTCTTGCTAAGAAACCACAGCACCAACAACTCATTGTGGATGCTGGAGCTTTGGCATATCTTATGGATTTGTTGAAGAGGCACAAGACCTGTGGCAATTCACCAGCACTTACTGGACTTCTAACGAGTGCAGCTAACGCCATCAACAACCTTGCGGCCGGAAATAGCAGCATTAAAACCCGTGTTGGTATGGAAGGCGGCATCCCTCCTCTTGTTGAATTATTTGAATTTGATGATGCAAAGCCACAAAGTGCGGCTGCAGGAGCTTTACTGAGTCTTGCATTAAAAAATAATGAGAACAAAAACCAGATTCTCAAATTGAATGTACTGCCTACGCTTGTGCTAATGCTTGGATCAGAGCATGCTACAACACATTGTGAAGCAGTTTCCGTGATTTCAATGCTGGCCTCTTATTCTCCAAAGATGACAACCAAAGTTCTTCTAGCTGGTTCTCTGCAACCAGTAATTATATTGCTTAGATCTTGCTGTTTCAAGTGTCAAAAAGAAGCAGCTCGTTTAGTTGGTATATTTGCAAGGACAGATTCTGATTGCAAGGTTCACATTGCTCAAAGAGGGGCTATACCGCCACTGATTGACATGCTTAAGTCTCCACATGCAGAGCTTCGAGAAATGTCAGGTTTTGCAATTGCAACACTTGTTGAGGACCCACACAATCAAGTTGGTATTGCTTATAATGGAGGTATAGAACCTTTACTCAACCTTCTTTCCTCCAAGAAAAAAACTGTCCAACATAATGCAACCTTTTGTGTGTACCGTCTTGCTGAAAATGAGGACAATGTTGTGGATATTATTAAGTTGGGCGGTGTTCAAAAACTATTGGATGGAGATTTCACAGCTAAAGTGCTGAAACAGCTGTTGCATCTTATACGATTCGGAGAAAAGGCTGTTCAAAGTTATGTGGTTTTGGCTCTTGCTCATTTATGTTCCTCTGATGATCAGAAAATTATTTTTGTTGACAACAATGGACTTGCCTTCCTAGTAGATCTGCTAACATCTAGAAATCTTAATAAAAAACGTGAGGCTTCAATGGCACTTTACTCTTTGGCGATCAGAAGCACATCTATCTCTCCCTTAGATACTACTCCTTCGTCCATGACTCCTCAGGTATATTTATGCGAGCGATATGTTAACAATCCTGCGCTTTCTGATGTCACCTTTTTAGTTGAAGGAAAACGGTTCTATGCTCATCGAATTTCTTTGCTTGCTTCCTTTGATGCGTTTCGAGCAATGCTTGATGGTGTTTACCGGGAGAAGGAAGCGAAAGATATACCGATTCCAAACATTAAATGGGTTGTCTTTGAATTGATGATGAGATTTATCTATACAGGAACTGTAGATGTCAATTTGGATCTTGCTCAAGATCTCCTAAGAGCTGCTGATCAGTATCTTGTGGATGGTCTTAAGCGATCTTGTGAATGTGTAATAGCTCAGGATATTTCCTTGGGAAATGTTTCTCAATTGTATGAGTTATCAGATTCAATGAATGCTATGTCATTGAGGCGAGCATGTATATTGTTTTTGTTGGAGCAATTTGAGAAATTGAGTGTCAAACCATGGTATAACTGCCTGCTGCGTCGTGTCGCCCCAGATATAATCGAATTTTTCAGAAGTTTACTTGGGAGTGGAATAGATAAGAAATAG 2049 0.4241 MDQPPSSAGRRSLKRNRKQEFAEEGAVHPTTDCKVLALEPQQSHQDLLSEVVAQVTILNSSLSSSQSDRLTAKRAAHLLSELAENELIVDSIVDCGAVPALLQHLKAPEPGVTKPYEHEVEQGCLLILALLAKKPQHQQLIVDAGALAYLMDLLKRHKTCGNSPALTGLLTSAANAINNLAAGNSSIKTRVGMEGGIPPLVELFEFDDAKPQSAAAGALLSLALKNNENKNQILKLNVLPTLVLMLGSEHATTHCEAVSVISMLASYSPKMTTKVLLAGSLQPVIILLRSCCFKCQKEAARLVGIFARTDSDCKVHIAQRGAIPPLIDMLKSPHAELREMSGFAIATLVEDPHNQVGIAYNGGIEPLLNLLSSKKKTVQHNATFCVYRLAENEDNVVDIIKLGGVQKLLDGDFTAKVLKQLLHLIRFGEKAVQSYVVLALAHLCSSDDQKIIFVDNNGLAFLVDLLTSRNLNKKREASMALYSLAIRSTSISPLDTTPSSMTPQVYLCERYVNNPALSDVTFLVEGKRFYAHRISLLASFDAFRAMLDGVYREKEAKDIPIPNIKWVVFELMMRFIYTGTVDVNLDLAQDLLRAADQYLVDGLKRSCECVIAQDISLGNVSQLYELSDSMNAMSLRRACILFLLEQFEKLSVKPWYNCLLRRVAPDIIEFFRSLLGSGIDKK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02370 682 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 5 675 IPR044282 -
Accr4g02370 682 MobiDBLite consensus disorder prediction 13 27 - -
Accr4g02370 682 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 362 404 IPR000225 GO:0005515
Accr4g02370 682 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 195 230 IPR000225 GO:0005515
Accr4g02370 682 MobiDBLite consensus disorder prediction 1 27 - -
Accr4g02370 682 SUPERFAMILY ARM repeat 58 409 IPR016024 -
Accr4g02370 682 SUPERFAMILY ARM repeat 391 488 IPR016024 -
Accr4g02370 682 Gene3D - 36 207 IPR011989 -
Accr4g02370 682 ProSiteProfiles BTB domain profile. 518 585 IPR000210 GO:0005515
Accr4g02370 682 SMART BTB_4 518 615 IPR000210 GO:0005515
Accr4g02370 682 Gene3D Potassium Channel Kv1.1; Chain A 509 652 IPR011333 -
Accr4g02370 682 SMART arm_5 184 224 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 268 308 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 85 133 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 446 486 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 351 391 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 226 266 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 310 350 IPR000225 GO:0005515
Accr4g02370 682 SMART arm_5 134 182 IPR000225 GO:0005515
Accr4g02370 682 Gene3D - 208 508 IPR011989 -
Accr4g02370 682 SUPERFAMILY POZ domain 509 611 IPR011333 -
Accr4g02370 682 Pfam BTB/POZ domain 511 612 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02370 Accr-Chr4 40417266 40422353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02370 314 485 U-box Gene Family AT5G40140 30.286 1.01e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr4g02370 BTB 1.3e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02370 - - sind:105165291 770.77