Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02352 ATGGAACCCAGATATGGATTTCTGGCTTTCTTCTTCGTCTTCTTCATCGCTTCAGTTTTTCCCAGTGCAGAGTCCAGTTGCAGCAAGAGTTGTGATTTAGCTCTAGCTTCTTACTATGTTTGGCCAGGTTCTAATCTATCATACATCGCACAACAAATGCGATCCCCGATTCTGACAGACGAAACCGTCATCGTCAGCTACAACAAAGATCAAACAATTTCCAGAGATTATGTTCAATCCACTACAAGAATCAACATCCCATTCCCATGTGATTGTCTTCAAGATGGATCTCCGGGTCATCTGTTTCAGTACACGATTAACCAAGGGGATACCTACAAGACTGTTGCTGAGACGTACTATGCCAATTTGACCACTGTTGAGTTGTTGAGGAAGTTCAATGGCGACACAATTCCTGCAAGTGGAACACTTAATGTCGCTGTTAGTTGTTATTGTGGTAACAGCCAAGTATCAAAGCTCTATGGATTGTTCATCACATGGCCACTTAGGCCTGAGGATACTTTGCAATCAATTGCCAGTAATGAGAAGCTTGACGCTGGGTTGCTGCAGAAGTATAATCGGGGTGTGAATTTCAGCCAAGGGAGTGGATTGGTTTATATACCTGGCAAAGATCAAAATGGCATCTACCCTCCAATGGAGTCTAGTTCCAGAGCAGGTCTGTCTGGCGGGGCTATTGCTGGAATATCTATTGGAGTAGTAGCTGCACTTCTGCTGTTGGCAGTTTCTATATATTTTGGATATTTCCGAAAGAAGATGGATGACACAAAACCAATCTCTCAAGATTTCCAAGAGTTCTCTGTTCAAGAAGAGAAGGGATATGTTGGTCCTACTGGCATCTCAGTAGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTGCAGCCACAAATAATTTCAGTATGGCTAATAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTTTTATGCAGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAGGCAACTAGAGAATTTCTTGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCGCTTAATTGGGTATTGCACTGAGAACTCTCTTTTCCTGGTTTATGAATTCATTGATAATGGAAACTTGAGTCAACATCTGCGGGATACAGGAAGAGATCCGTTACCATGGCCTACCCGAGTTCAAATTGCTCTGGATTCTGCTAGAGGTCTTGAATATATTCATGAGCATACAGTTCCTGTGTATATCCACCGCGACATAAAGTCGGCAAATATATTGATAGATAATAGCTTCCATGGGAAGGTTGCAGATTTTGGATTAACTAAACTGGCAGAAGTCGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCACCAGAATATGCTCAGTATGGTGATGTCTCTCCTAAGGTAGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCCAAGGAAGCAATTGTCAAGACAACTCAATCAGATGCTGACTCAAAGGGCCTTGTAACAATGTTTCATGGAGTTCTTGATCAGCCCGATCCTACGGAAGATCTTTGCAAATTGGTTGACCCAAGGCTTGGGGATGACTACGCTATTGACTCGGTTTTGAAAATGGCTCAACTTGCAAAAGCATGCACACAAGAGAATCCCCAACTGCGGCCAACTATGAGATCCATTGTAGTTGCTCTCATGACACTTTATTCTTCCACCAACGATTGGGATGTTGGTGCCTTCTACAATAACCAGAATCTTATAAATCTGATGTCAGGAAGATAA 1815 0.4237 MEPRYGFLAFFFVFFIASVFPSAESSCSKSCDLALASYYVWPGSNLSYIAQQMRSPILTDETVIVSYNKDQTISRDYVQSTTRINIPFPCDCLQDGSPGHLFQYTINQGDTYKTVAETYYANLTTVELLRKFNGDTIPASGTLNVAVSCYCGNSQVSKLYGLFITWPLRPEDTLQSIASNEKLDAGLLQKYNRGVNFSQGSGLVYIPGKDQNGIYPPMESSSRAGLSGGAIAGISIGVVAALLLLAVSIYFGYFRKKMDDTKPISQDFQEFSVQEEKGYVGPTGISVDKSVEFSYEELAAATNNFSMANKIGQGGFGAVFYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTENSLFLVYEFIDNGNLSQHLRDTGRDPLPWPTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDNSFHGKVADFGLTKLAEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTTQSDADSKGLVTMFHGVLDQPDPTEDLCKLVDPRLGDDYAIDSVLKMAQLAKACTQENPQLRPTMRSIVVALMTLYSSTNDWDVGAFYNNQNLINLMSGR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02352 604 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Accr4g02352 604 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Accr4g02352 604 SMART serkin_6 305 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02352 604 Gene3D Phosphorylase Kinase; domain 1 290 375 - -
Accr4g02352 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Accr4g02352 604 ProSiteProfiles Protein kinase domain profile. 305 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02352 604 SUPERFAMILY Protein kinase-like (PK-like) 287 576 IPR011009 -
Accr4g02352 604 FunFam LysM receptor kinase 2 284 375 - -
Accr4g02352 604 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 589 IPR044812 GO:0019199|GO:0045087
Accr4g02352 604 FunFam PTI1-like tyrosine-protein kinase 3 376 590 - -
Accr4g02352 604 Gene3D Transferase(Phosphotransferase) domain 1 376 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02352 Accr-Chr4 39922747 39928553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02352 13 604 Receptor kinase-like Gene Family AT3G21630 57.353 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr4g02352 PK_Tyr_Ser-Thr 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02352 K13429 - gmx:100777781 799.66