Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02348 ATGGTACCCAGATTTGGGTTTCTACTTCTCTTCTTATTGATATTCTCTCTTTTTCTCAATTCAGAATCAAAGTGTAAGAAAGGATGTGAGTTGGCCCTTGCCTCCTACTACATTTGGCCCGGTCTTCTCGATATTACTAACCTTCCACAGATCATGAATTCCCCAGTTCTTCAAACAATACAGGATATCATTAGCTATAACAAGGACCAATTATTGAGCGAAAACTATGTCGAAACCGAAGCTCGTGTGAAAGTTCCGTTCCCTTGCGATTGCATCGATGGGGAGTTTCTAGGTTACGTATTCGAGTACCAAATTCAGAAAGGAGACACCTATACGTTGATTGCGAATCAGAATTATGCCAATTTGACCACCGTTTCGATGTTGGAGAGTGTAAATAGGTATTCGCCTGAGAATATTCCTGAATCTGGAAAGCTCAATGTGACGGTGAACTGTTCGTGTGGGGATATCAAAATTTCGAAAGAATATGGGTTGTTCGTCACTTACCCACTTAGAGCTGAGGATTCTTTGGATTCCATTGCCAACATGACGGGGCTTCATCAAGAGTTGCTGCAGAGGTATAATCCTGGTGTTGATTTCAACAAAGGGAGTGGTTTGGTGTATATCCCGGGAAAAGACCAAAATGGTGTCTTTACGCCGCTGCCCCGTAGCAAAGGTCTAAATGGTGGGGCTGTTGCTGGAATATCTGCTGGAGCAGTAGCTGGGCTTCTCTTATTGGCAGCTTTTTTGTATGTTGTATATTACCATAGGAAGGAGAAGGAAAAATTGCTTTCTGAAGAATTAGTAGTCTACTCTGCTCAAACTGGGAATGATTCCAATGGTCCTCCTGCTGCTGCTAGTATTACTGTGGAGAAGTCAGTGGAGTTCTCATATGAAGAACTAGCTCTAGCGACTCACAACTTCAGTATGGCAAATAAAATTGGTGAAGGTGGTTTTGGGGCTGTTTACTATGCGGAGCTGAGAGGCGAGAAAGCTGCAGTTAAAAAGATGAAGTCAGAAGATACGAAAGAGTTTCTTGCTGAATTGAAAGTGTTGGCAAATGTTCATCACCTGAACTTGGTACGCTTGATTGGATATTGTGTTAAGAAGCATTTTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAAACGAACACTTACGAGATCCAGGGAGAGAACCATTGCCATGGTCAATGCGAGTGCGAATTGCTCTAGATTCGGCCAGAGGTCTTGAATACATTCATGAGCATACGGTGCCCGCATATGTTCATCGTGACATAAAGCCAGCTAATATATTGATAGACCGAGACTTCCATGCAAAGGTTGCAGATTTTGGGTTGACCAAACTCATTGAAGTGGGAAGGTCATCATATCTCTCTGAACATCTTGCAGGAACATTTGGTTATATACCACTCCAGAATGATTGGAGTTTTAAAACCGATGTCTATGCTTTTGGAGTTGTTCTCTATGAACTTATATCTGCTAAAGAAGCTGTGCTCAGTGTTGGTGAAGCTGGTTCTGAAGCAAAAACCCTTGTCTCTTTGTTTGAAGAAGCTCTTAAGCAGCCTAATCCTGAAAAACGTCTTCTAAAGCTTGTTGATCCCAGGCTTGAAGGAGAATATACATTCGATTCAATTTACAAGATGGTCCAACTAGCCAAGGCGTGCACAGAGGAAAAACCAGCCCGACGTCCAAGTATGAGATCTGTTGTGGTGTCTCTAATGACAATCTTATCTTCTATAGGCTAG 1752 0.4195 MVPRFGFLLLFLLIFSLFLNSESKCKKGCELALASYYIWPGLLDITNLPQIMNSPVLQTIQDIISYNKDQLLSENYVETEARVKVPFPCDCIDGEFLGYVFEYQIQKGDTYTLIANQNYANLTTVSMLESVNRYSPENIPESGKLNVTVNCSCGDIKISKEYGLFVTYPLRAEDSLDSIANMTGLHQELLQRYNPGVDFNKGSGLVYIPGKDQNGVFTPLPRSKGLNGGAVAGISAGAVAGLLLLAAFLYVVYYHRKEKEKLLSEELVVYSAQTGNDSNGPPAAASITVEKSVEFSYEELALATHNFSMANKIGEGGFGAVYYAELRGEKAAVKKMKSEDTKEFLAELKVLANVHHLNLVRLIGYCVKKHFLFLVYEYIDNGNLNEHLRDPGREPLPWSMRVRIALDSARGLEYIHEHTVPAYVHRDIKPANILIDRDFHAKVADFGLTKLIEVGRSSYLSEHLAGTFGYIPLQNDWSFKTDVYAFGVVLYELISAKEAVLSVGEAGSEAKTLVSLFEEALKQPNPEKRLLKLVDPRLEGEYTFDSIYKMVQLAKACTEEKPARRPSMRSVVVSLMTILSSIG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02348 583 Gene3D Phosphorylase Kinase; domain 1 281 378 - -
Accr4g02348 583 FunFam LysM receptor kinase 2 286 378 - -
Accr4g02348 583 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Accr4g02348 583 FunFam PTI1-like tyrosine-protein kinase 3 379 583 - -
Accr4g02348 583 SUPERFAMILY Protein kinase-like (PK-like) 286 575 IPR011009 -
Accr4g02348 583 ProSiteProfiles Protein kinase domain profile. 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02348 583 Pfam LysM domain 103 139 IPR018392 -
Accr4g02348 583 Gene3D Transferase(Phosphotransferase) domain 1 379 582 - -
Accr4g02348 583 Pfam Protein tyrosine and serine/threonine kinase 309 574 IPR001245 GO:0004672|GO:0006468
Accr4g02348 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Accr4g02348 583 SMART serkin_6 307 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02348 583 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 581 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02348 Accr-Chr4 39681501 39692199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02348 12 583 Receptor kinase-like Gene Family AT3G21630 54.975 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr4g02348 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02348 K13429 - gmx:100803042 644.81