Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02342 ATGGATGGAATTGGAGACGAAACCTCTGAGTTCTTTCATGGCCAAGCTCAATTGTACAGAGTCATAAATCTTTGGATGGCTCCTTTATGTGTAAAGTGTGCCATTGAGCTTGAAATTCCAGATATAATCCACAAACATGGCAAACCCATCTCTCTTTCTCACTTGGTGTCAGCTCTCAAAATTCCACCCTCAAAAACTACCTTTGTGAAAGGTCTCATGCATTTGCTAGCTCACAATGGCATCTTCTCTATCACCAAAAGCAACAACAATGAAGAAGAAAGTGAAGAAGAGGTATCATATGATCTCACTTCTGCGTCAAAGCTTCTTGTGAGTGGCACAGACCATTGTTTATCTCCAATGGTTCTGTTGGCGACATACCCTTCTATGATTAATTTGTATCATCACTTGGGGAAATGGGCTCGTGGGGATGAAAGCACATTGAAAGAGACAATATTTAACGAAGGTAACATTGCTTGTGACCTTTTTAAACAAAACCCAGCAGATATTGCGGTTGTGCAAGAAGGGATGGCTAGTGATTCGAGATTAATTAAAGTGGCTTTGATTAGAGACTTTAAATATGTTTTTGATGGGTTAAGTTCAATTGTTGATGTTGGTGGTGGAACTGGGACTGTTGCTAAGATTATCTGTGAAGCATTCCCCAATTTGAAATGTACAGTGCTGGATCTTCCTGAGGTTGTTTCAAACTTATCTGGAAATACCAATTTGAGTTTTGTTTTTGGGGACATGTTCAAATTCATCCCTCCTGCTGATGCTGTTCTGATTAAGTCTGTTCTACTGAATTGGGATGATGAAGATTGCATAAAGGTACTCAAAAATGCCAAGGAAGCTATCTCAAGCAAAGGAAATGAAGGAAAAGTGATAATCATAGATTTGGTTTTTGATGAAAGGCATGACGAGAATGAAATGCTAGAAGGGAAGCTCTTACTCAATATATTCTTCACAGCTAAGCATAATTCAAAACTTAGATCTGAGCAAGAATGGAAGCAACTCTCCCTAAAGGCAGGCTTCAAGGGTTTCAAGATGTTTCCGATGTTTGGCCTTAGGTCTCTTATTATGCTTCATCCTTAG 1089 0.3921 MDGIGDETSEFFHGQAQLYRVINLWMAPLCVKCAIELEIPDIIHKHGKPISLSHLVSALKIPPSKTTFVKGLMHLLAHNGIFSITKSNNNEEESEEEVSYDLTSASKLLVSGTDHCLSPMVLLATYPSMINLYHHLGKWARGDESTLKETIFNEGNIACDLFKQNPADIAVVQEGMASDSRLIKVALIRDFKYVFDGLSSIVDVGGGTGTVAKIICEAFPNLKCTVLDLPEVVSNLSGNTNLSFVFGDMFKFIPPADAVLIKSVLLNWDDEDCIKVLKNAKEAISSKGNEGKVIIIDLVFDERHDENEMLEGKLLLNIFFTAKHNSKLRSEQEWKQLSLKAGFKGFKMFPMFGLRSLIMLHP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02342 362 PIRSF O-mtase 2 362 IPR016461 GO:0008168
Accr4g02342 362 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Accr4g02342 362 Gene3D - 5 109 IPR036388 -
Accr4g02342 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Accr4g02342 362 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Accr4g02342 362 Gene3D Vaccinia Virus protein VP39 111 362 IPR029063 -
Accr4g02342 362 PANTHER O-METHYLTRANSFERASE 18 345 IPR016461 GO:0008168
Accr4g02342 362 Pfam O-methyltransferase domain 134 344 IPR001077 GO:0008171
Accr4g02342 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 362 IPR016461 GO:0008168
Accr4g02342 362 FunFam O-methyltransferase ZRP4 111 362 - -
Accr4g02342 362 SUPERFAMILY "Winged helix" DNA-binding domain 8 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02342 Accr-Chr4 38805458 38807132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02342 28 348 Monolignol Biosynthesis Gene Families AT5G54160 29.573 6.65e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02342 K22588 K13262 gmx:100818947 362.073