Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02340 ATGTTGAGGAACTATAGAACTGGAGCCAGAGCAACCAGAGTTCCACATGCAGGTGCGAGCTTCAGACACCTTACTGCGACGCCACTGGAGGACGATACTTGCAGGTGGTCGATAATAGCAGCTCATTTACCTGGGAGGACAGACAATGATATCAAGAATTATTGGAACACCAAGCTTAAGAAGAAAATGATGCTTATGAATCCTTCAGTTAAAGGGAATAAGCCTCATCATCCTCAAGATCAACAACCTAACCTTTTAACCATTCTTCAAAACTCAACACCAGCTTCACCATTATCATTCTCAGACAACTCCAACTCTTACTACCACCATGCTAATGTCTCTTTCACAGGCCCTTCCAATCTTTTGACTAGTAACACTTCTGCTTCTAACTTCAATTTTCAGCCCCAGAACATTACTTTCATGGGATACATTCAAAATCAGCCAGTTTCTATGATTACTGGTGAGGCTTCTAGTTGCAGCTCTTCTGATGGAAGCTGCAATAACAACCAGATTACTCATATCAAAGAAACATAG 534 0.4157 MLRNYRTGARATRVPHAGASFRHLTATPLEDDTCRWSIIAAHLPGRTDNDIKNYWNTKLKKKMMLMNPSVKGNKPHHPQDQQPNLLTILQNSTPASPLSFSDNSNSYYHHANVSFTGPSNLLTSNTSASNFNFQPQNITFMGYIQNQPVSMITGEASSCSSSDGSCNNNQITHIKET 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02340 177 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 63 IPR017930 -
Accr4g02340 177 Pfam Myb-like DNA-binding domain 35 57 IPR001005 -
Accr4g02340 177 ProSiteProfiles Myb-like domain profile. 35 59 IPR001005 -
Accr4g02340 177 CDD SANT 35 59 IPR001005 -
Accr4g02340 177 SUPERFAMILY Homeodomain-like 32 67 IPR009057 -
Accr4g02340 177 Gene3D - 25 85 - -
Accr4g02340 177 PANTHER OS09G0431300 PROTEIN 34 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02340 Accr-Chr4 38674635 38675168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02340 35 64 MYB Transcription Factor Family AT5G23000 90.000 9.98e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr4g02340 Myb_DNA-binding 5.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02340 K09422 - gmx:100794828 120.938