Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02321 ATGTCTCTCTCTGCTGCTTTGTTTTCTCTCCTTCTCACCACCACCTTGCTAATTTTCATGCAAAATCTGGTAATTGACGCTGCGTGTTCCGATTGTTTTGTATCTTCTCAAGCAACCTATTACCCAAACTCCGATGAACATGGAACAGATGTAGGTGCTTGTGGGTTTGGTTCCTTTGGTGCTACCATCAATGGCGGGGACGTCTCAGCTGCTTCTAATCTCTATCGTGATGGTCTCGGCTGTGGTGCCTGTTACCAGGTGAGGTGTACGAACAGTGCTTATTGCTCAGATAAAGGAGTGACAATAGTGATAACGGACCAGGGTTCAGGTCCTGGCACAGATTTCATTCTTAGCAAACGAGCCTTCTCTCACATGGCTCAGACCAGTGATGCTGCTGCCACTTTGTTGGCTTATGGCGTCGTTGATATTCAATATAGAAGAGTTTCATGTAGCTACCCATACAAAAATATCACTATTAAGATACATGAGGGAAGCAGCAACCCTAATTACTTGGCCTTCGTCATAGAGTACCAACAAGGCAAGAGAGATATCACTGCTGTACAGCTCTGTGAGACGCAGAACTTTGTGTGCAAGTTGCTGAGTAGGAGTTTTGGAACTGTGTGGACAGTGAACTCTCCTCCAAGTGGACCATTATCAGTGAGGATGCTGTTTAGTGATGAAGATGGAGAAGACACGTGGGTTGTTCCGGTGAATAACATTCCTGCAGATTGGAAAGCTGGAGAAAGCTATGATTCTGGAGTTCAAGTGAATCAATAG 777 0.4517 MSLSAALFSLLLTTTLLIFMQNLVIDAACSDCFVSSQATYYPNSDEHGTDVGACGFGSFGATINGGDVSAASNLYRDGLGCGACYQVRCTNSAYCSDKGVTIVITDQGSGPGTDFILSKRAFSHMAQTSDAAATLLAYGVVDIQYRRVSCSYPYKNITIKIHEGSSNPNYLAFVIEYQQGKRDITAVQLCETQNFVCKLLSRSFGTVWTVNSPPSGPLSVRMLFSDEDGEDTWVVPVNNIPADWKAGESYDSGVQVNQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02321 258 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Accr4g02321 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Accr4g02321 258 PRINTS Expansin/Lol pI family signature 197 211 IPR007118 GO:0005576
Accr4g02321 258 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Accr4g02321 258 PRINTS Expansin/Lol pI family signature 138 154 IPR007118 GO:0005576
Accr4g02321 258 CDD DPBB_EXLB_N 34 150 - -
Accr4g02321 258 Gene3D - 22 151 IPR036908 -
Accr4g02321 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 252 IPR007117 -
Accr4g02321 258 Pfam Expansin C-terminal domain 157 237 IPR007117 -
Accr4g02321 258 Gene3D - 154 256 IPR036749 -
Accr4g02321 258 PANTHER EXPANSIN-B3 16 255 - -
Accr4g02321 258 SUPERFAMILY PHL pollen allergen 155 252 IPR036749 -
Accr4g02321 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 155 IPR007112 -
Accr4g02321 258 Pfam Lytic transglycolase 71 145 IPR009009 -
Accr4g02321 258 SUPERFAMILY Barwin-like endoglucanases 24 153 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02321 Accr-Chr4 37960355 37962345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02321 16 254 Expansin Gene Family AT4G17030 43.802 9.45e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02321 - - gmx:100794009 405.986