Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02256 ATGGAAGATCGACCTTCGCACTTTTCTTTCTTTCATACAGGAACCTACATTGATAAGAAGTGTCCCTTCACTGGCTCTGTTTCTATCAGGGGTCATATCATTGCTAGCACGTGTCACAGTGCTACGATGACAAGAACCATAACTGTTAGAAGGAACTATCTCCATCTTGTCAAGTACCAGAGGTGTGAGAAGAGGCACTCAAACATTCCTTCTCACATGTCTCCTTGCTTTCGTGTAAAAGAAGGAGATTATGTGATCATTGGCCAGTGCAGGCCACTATCAGAGCTGGTGAGGTTCAACGTGCTAAAAGTGATCCCGACTGGATCTTCTAAAACAAACCCACACTTGTTAACTGTTTCTTTACTGAATACCAACAAGGCCTTATAG 387 0.4315 MEDRPSHFSFFHTGTYIDKKCPFTGSVSIRGHIIASTCHSATMTRTITVRRNYLHLVKYQRCEKRHSNIPSHMSPCFRVKEGDYVIIGQCRPLSELVRFNVLKVIPTGSSKTNPHLLTVSLLNTNKAL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02256 128 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 13 110 IPR000266 GO:0003735|GO:0005840|GO:0006412
Accr4g02256 128 ProSitePatterns Ribosomal protein S17 signature. 82 94 IPR019979 GO:0003735|GO:0005840|GO:0006412
Accr4g02256 128 PRINTS Ribosomal protein S17 family signature 92 99 IPR000266 GO:0003735|GO:0005840|GO:0006412
Accr4g02256 128 PRINTS Ribosomal protein S17 family signature 49 72 IPR000266 GO:0003735|GO:0005840|GO:0006412
Accr4g02256 128 PRINTS Ribosomal protein S17 family signature 82 92 IPR000266 GO:0003735|GO:0005840|GO:0006412
Accr4g02256 128 Pfam Ribosomal_S17 N-terminal 13 34 IPR032440 -
Accr4g02256 128 Gene3D - 11 116 - -
Accr4g02256 128 SUPERFAMILY Nucleic acid-binding proteins 31 109 IPR012340 -
Accr4g02256 128 Pfam Ribosomal protein S17 38 103 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02256 Accr-Chr4 34691876 34692505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02256 14 118 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 75.472 2.07e-55 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02256 K02949 - gmx:100500186 172.555