Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02222 ATGCAGGCAATTTGTTTGATATTCTTATTGTACGGAGCGATTGTGTTGGGGAATTCAGATATTGATGCATTACTTGAACTCAAGAAGAGCATTCAGAATGACCCTTCTGGACTAGTTAATTCTTGGGATTCTAGGTCTTTGGCTTCTGACGGATGTCCTCAGAATTGGTATGGGATATTATGTGACGTTGGCAATGTTATATCGATAACTCTGGATAATGCTGGTTTGGTTGGGGAGTTTAATTTCCTTTCCATTAATGGCCTTAAAATGCTTCAAAACTTGTCACTTTCAAACAACCAGTTCACAGGAAGTGTCTCACATTTTGGACCTATGAAGTCGCTAGAATTTCTCGATCTTTCAGTCAACAAGTTTCATGGGTCAGTACCCTCTGACCTGCTTGAATTACATAACATAGTGTATTTAAATCTTTCATCAAATCAATTTGATGGTACACTTCCTGTCGGCTTTGACAAACTCAAGCGGTTGAAGTATTTAGATTTGTGCTCTAATAACTTTTCTGGGGATATTATGCATATCTTTTCTCGTATGGGTGGTGTGGTTCATGTTGACCTAAGCACAAACAGGTTTTCTGGTTCACTGGATTTGGGACTTGGAAACAGCTCGTTTCTCTCCTCGATTCAGTATTTAAATGTTAGCCACAATTCCTTGGCTGGTGATCTGTTTGCTCATGATGGGATGCCATATCTTGACAGCTTAGAGGTCTTTGATGCTAATAATAATCAATTAGTGGGTAATATACCTTCCTTCACATTTGTGGTATCTCTAAGGATTCTTCGGCTTGGATGCAACCAATTATCTGGTTCTCTTCCAGAAGGTCTATTGAAGGAGAGTTCAATGGTGTTGTCTGAACTGGATCTTAGTCAAAACAACCTTGAAGGTCCTGTTGGAAGCATCACTTCTGGAACTCTGAAGAAGCTTAATTTATCTTCAAACAAGCTGTCAGGCCCCATACCTTTCAAGGTGGGCCACTGTGCCATAATTGATTTAAGTAACAACATGTTATCGGGTAACTTGTTGAGAATTCAATATTGGGGTAATTATGTTGAGGTGATTCAGCTTAGTTCAAATTCGTTGACAGGAATGCTTGCTAACCAAACAACACAATTCTTGAGGTTGACTGAACTTAAGATATCTAATAACTCATTAGTGGGCAGTCTCCCTTCAGTCATAGGAACATACCCTGAACTAAAAGAGATTGATCTTAGCCACAACCTACTTTCTGGGTTCCTCCTTCCAAGCTTTTTCACCTCAACTAAATTGGCCAAGCTTAACCTCTCACACAACAACATTTCTGGATCAGTATATTTTCAACAAATTCAGAATAACCCGCTAGTTTCTGTTGAAAATTCTGGTCTAGTTTCTGTTGATCTCTCATACAACAACTTGAGCGGGCATCTACCTGCCGATATAAGTAAGCTTCACAATTTGGCAAGTCTCAATCTATGTAACAACAAATTCGAAGGTATTATTCCTGATGATCTTCCTGATCAGCTGAGAGAACTCAACATGTCCTTCAACAATTTTTCTGGCATTGTGCCTCATAAATTAATGAAGTTTCCTGAATCAGCATTTCACCCAGGAAATTCTTTGCTGATCTATCCTCATTTGCTTGCTTCACCAGAAGATGGCGGTGAACTAGGCTTGAAGGAAAAGGGGCCACATATAAAATCTGCAACCAAGATTGCCTTGATTGCAAGTTTGGTTTCTGGTGCTTTTGTTATGGCCCTTCTGAGTGTAATAAGTTTTTATAGGGTTCACTGGCATAAACAAACAACTGCGCATGAAAATAGAGTGAAAGATATTGCTCCTCGGAGTTCTCCATCTGGTGGTGAAGTACCTAATAGAAACAAAGAAGCAATATCTTCAACCCAGAAGGGATCTGATGATGTCAGCAATGTTCATACTGCCGTGGAGAAGCCAAAAGATATTGATTTTTCTGAATTTGTTAAGAATGAGGAAGGAATATCATCTCCAATGTCTTTTCTGTCATTTTCAAATCCTTTATCTTCTAGTAGCCACCACCCATTTGAGAATCCTGGTGCTCTCAAAATATGCTCACCGGATAACTTGTTCGGAGATTTGAATCTTTTTGATGGGGCCTTGGAGCTCACTGCAGAAGAATTTTCTAGTGCTACAGCAGAAATTATCGGTAGGAGCTGCCATGGAATTCTGTATAAAGCTATACTTGACTCAGGTCATGCATTGGCTGTCAAGTCATTCAGGGAAGGAATAGCCAAGAACAAGAAGGATTTTGCAAGGGAAGTTAAGAAACTTGGGACCATCAAACATCCAAGTCTGGTTTCTCTTCAGGGTTACTACTTGGGTCCAAAGGAGACTGATAAGTTCATCATATCCAATTATGTCAATGCACAATCTTTGGACTTTTTTCTCCATGATAGAAGGAATGTTCATCCAATGTCTCTTGATGAAAGGTTGAGGGTGGCTATAGCTGTGGCACAGTGTCTGTATTACTTGCACAATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATCCTCCTTGAAATCCCTAACCACAATGTGCTGCTCACTGACTACAGCCTGCATCGGATACTAACCACAGCTGGTACTGCCGAGCAAGTTCACAATGCAGGTCTACTTGGCTACCGGCCTCCCGAGTTTGCTAGCTCAAGCAAACCATGTCCATCCTTGAAGAGTGATGTGTATGCATTTGGGGTGATCTTGTTAGAGCTTCTAACAGGAAGAAATTCTGGAGACATTGTTACGGGGATCCCAGGGGTCGTTGTCCTCGCTGACTGGGTGCACTTCTTGGCGGACCAAAATCGAGGTAGCGAGTGCTTCGATAGGCTACTCTTGGACAGGCATGGTGGTGGGGACCGCCGGCCTCCTCATGTTCTTGACGAAATGTTCAAGGTGGCTCTTAGATGCATCCTACCGGCATCTGAAAGGCCTGACATGCAAACTGTTTTTGAGGAGCTTTCAACATTAAGGTAG 3003 0.4139 MQAICLIFLLYGAIVLGNSDIDALLELKKSIQNDPSGLVNSWDSRSLASDGCPQNWYGILCDVGNVISITLDNAGLVGEFNFLSINGLKMLQNLSLSNNQFTGSVSHFGPMKSLEFLDLSVNKFHGSVPSDLLELHNIVYLNLSSNQFDGTLPVGFDKLKRLKYLDLCSNNFSGDIMHIFSRMGGVVHVDLSTNRFSGSLDLGLGNSSFLSSIQYLNVSHNSLAGDLFAHDGMPYLDSLEVFDANNNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEGLLKESSMVLSELDLSQNNLEGPVGSITSGTLKKLNLSSNKLSGPIPFKVGHCAIIDLSNNMLSGNLLRIQYWGNYVEVIQLSSNSLTGMLANQTTQFLRLTELKISNNSLVGSLPSVIGTYPELKEIDLSHNLLSGFLLPSFFTSTKLAKLNLSHNNISGSVYFQQIQNNPLVSVENSGLVSVDLSYNNLSGHLPADISKLHNLASLNLCNNKFEGIIPDDLPDQLRELNMSFNNFSGIVPHKLMKFPESAFHPGNSLLIYPHLLASPEDGGELGLKEKGPHIKSATKIALIASLVSGAFVMALLSVISFYRVHWHKQTTAHENRVKDIAPRSSPSGGEVPNRNKEAISSTQKGSDDVSNVHTAVEKPKDIDFSEFVKNEEGISSPMSFLSFSNPLSSSSHHPFENPGALKICSPDNLFGDLNLFDGALELTAEEFSSATAEIIGRSCHGILYKAILDSGHALAVKSFREGIAKNKKDFAREVKKLGTIKHPSLVSLQGYYLGPKETDKFIISNYVNAQSLDFFLHDRRNVHPMSLDERLRVAIAVAQCLYYLHNEKAIPHGNLKSTNILLEIPNHNVLLTDYSLHRILTTAGTAEQVHNAGLLGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGRNSGDIVTGIPGVVVLADWVHFLADQNRGSECFDRLLLDRHGGGDRRPPHVLDEMFKVALRCILPASERPDMQTVFEELSTLR 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02222 1000 Gene3D Ribonuclease Inhibitor 131 183 IPR032675 -
Accr4g02222 1000 Gene3D Ribonuclease Inhibitor 19 130 IPR032675 -
Accr4g02222 1000 SMART LRR_typ_2 111 135 IPR003591 -
Accr4g02222 1000 SMART LRR_typ_2 480 504 IPR003591 -
Accr4g02222 1000 SMART LRR_typ_2 259 283 IPR003591 -
Accr4g02222 1000 SMART LRR_typ_2 210 230 IPR003591 -
Accr4g02222 1000 SMART LRR_typ_2 88 110 IPR003591 -
Accr4g02222 1000 Gene3D Phosphorylase Kinase; domain 1 702 794 - -
Accr4g02222 1000 ProSiteProfiles Protein kinase domain profile. 717 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02222 1000 FunFam Nuclear pore complex protein NUP107 17 178 - -
Accr4g02222 1000 Pfam Protein tyrosine and serine/threonine kinase 721 995 IPR001245 GO:0004672|GO:0006468
Accr4g02222 1000 Gene3D Ribonuclease Inhibitor 190 546 IPR032675 -
Accr4g02222 1000 PANTHER OS07G0626500 PROTEIN 8 91 - -
Accr4g02222 1000 Gene3D Transferase(Phosphotransferase) domain 1 796 1000 - -
Accr4g02222 1000 Pfam Leucine rich repeat N-terminal domain 18 62 IPR013210 -
Accr4g02222 1000 SUPERFAMILY Protein kinase-like (PK-like) 721 996 IPR011009 -
Accr4g02222 1000 MobiDBLite consensus disorder prediction 616 638 - -
Accr4g02222 1000 SUPERFAMILY L domain-like 235 523 - -
Accr4g02222 1000 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Accr4g02222 1000 MobiDBLite consensus disorder prediction 603 640 - -
Accr4g02222 1000 FunFam Leucine-rich repeat receptor-like protein kinase 702 794 - -
Accr4g02222 1000 SUPERFAMILY L domain-like 19 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02222 Accr-Chr4 32865670 32870137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02222 68 999 Receptor kinase-like Gene Family AT5G07280 29.333 1.91e-73 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr4g02222 PK_Tyr_Ser-Thr 7.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02222 - - ccaj:109792420 1361.67