Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02195 ATGGATTCATTTGAGCCAAATGGAAATGGGAATGACGACAGTTTACCACCACCACCTCCACCTCCTGAAGTCCCGCCAAATGTTGTTCCTGTGAAAGCTGAAGAGCTCCCTCCTGAACCGGTTAAGAAGAAGCCTTCTCGAGTTCCAATAGCCAGACGAGGCTTGGGATCCAAAGGGAGTAAACTGCAACTTCTCACCAATCATTTCAAAGTTGATGTCAATAACAAGGATGGTCATTTCTTCCATTACAGTGTAGCTCTTTTTTATGAAGATGGGCGACCTGTGGAAGGTAAGGGTGTTGGAAGAAAAGTAATTGATAGGGTGCAGGAAACTTACTCTTCTGAATTAGCGGGAAAAGACTTTGCCTATGATGGCGAGAAGAGTTTGTTTACTGTTGGAGCTCTTCCTCGAAACAAACTTGAGTTTACGGTTGTTCTAGAGGATATCATATCAAACAGCCGAAATAATGGAAATTGCAGCCCTGATGGTCATGGAAGTCCAAATGAGGGTGACAGGAAGAGGATGCGACGCCCAAATCGGGCAAAAACATTCAAAGTGGAGATTAGCTTTGCTGCAAAGATTCCTATGCAGGCCATTGCCAACGCATTACGTGGGCAGGAGACTGAGAATTTTCAAGAAGCCATAAGAGTTCTTGATATTATATTGAGGCAAAATGCTGCTAAGAAAGGCTGTCTTCTAGTTCGGCAATCCTTCTTCCACAATGATCCAATGAATTTTGCTGATGTAGGCGGTGGTGTTCTCGGCTGCCGAGGTTTTCATTCAAGTTTTAGGACCACACAGAGTGGCTTATCCCTCAATATCGATGTATCTACCACAATGATAATACAACCTGGGCCTGTGGTGGATTTCTTAATTGCGAACCAAAATGTGAGAGATCCTTATTCGCTTGACTGGAACAAGGCTAAGAAGACTCTGAAGAATTTGAGGATTACAACAAGCCCATCCAATCAAGAGTATAAGATCTGTGGGCTCAGTGAACTCCCATGTCGTCAGCAGACGTTTACTCTTAAGGGTAAGGGTGGTGATGAGAGTGCAGAGGAAATAACTGTTTTTGATTATTTTTCAAAATATCGTAATATAGAGCTTCGGTATTCTGCTGATATGCCTTGCATTAATGTTGGGAAGCCAAAACGCCCAACTTATTTTCCCATTGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAGGCACTTACTACACTACAAAGGGCATCATTGGTTGAAAAGTCTCGGCAGAAGCCACAAGAGAGAATGAGGGTTTTATCTGATGTTTTGAAAGTCAGCAAGTATGATTCTGATCCTCTGCTACAAAGCTGTGCTGTTCGAATAAATACTGGTTTTACACAGGTCGATGGCCGTGTTCTACCAGCCCCAAGGCTGAAGTTTGGCAATGGAGAAGAATTCAATCCAAGAAACGGGAGGTGGAATTTTAACAATAAGACATTTGCACAGCCAACAAAGATAGAGCGATGGGCCGTGGCAAACTTTTCTGCACGTTGTGATGTGAAATCTCTTGTTAAGGATCTGACTAGATGTGCTGGAAATAAAGGGATTCAAATAGATCCCCCATTTGATGTATTCGAGGAAAGTCCGCAGTTTAGGCGTGCCCCACCTATGGTCAGAGTGGATAAGATGTTCGAAGATATACAGTCGAAACTTCCTGGAGCTCCTCAGTTCCTTCTGTGTCTTCTTCCAGAGCGGAAAAATTGTGATATTTATGGTCCCTGGAAAAAGAAGAATCTTGCTGACTTTGGAATTATCAATCAGTGCATGTGTCCACAGAGGGTCAATGATCAATATCTGACCAATGTGTTGTTAAAAATCAATGCTAAGCTAGGTGGGATAAATTCATTTTTATCTGTTGAAAAAACTCCTTCTATCCCCATTGTTTCCAAAGCTCCTACCATTATCCTTGGGATGGATGTGTCACATGGTTCACCTGGCCAGACAGATATTCCTTCCATTGCAGCGGTGGTGAGCTCCAGACAGTGGCCTTTGATCTCAAAGTATCGGGCATGTGTTCGAACTCAATCTCCTAAGGTTGAAATGATCGACAATCTGTTCAAGCCTGTAGGTGAAAAGGAAGATGAGGGCATAATCAGAGAACTTTTGGTTGACTTCTATCAAAGTTCTGGGAACAGAAAGCCTGACAATATAATAATATTCAGGGATGGGGTTAGCGAATCGCAGTTCACTCAAGTTTTAAACATCGAGCTTAGTCAAATCATTGAGGCCTGTAAATTCCTTGATGAACAGTGGAACCCCAAATTTGTTGTGATTGTGGCTCAGAAAAACCACCACACCAAATTTTTCCAGAATGGGTCTCCTGATAATGTTCCCCCTGGTACTATTATTGACAACAAAATCTGTCATCCCCGAAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATCGGAACCACTAGGCCCACACATTACCATGTTCTGTTAGATGAGATTGGTTTCTCTGCAGATGATCTACAGGAACTGGTGCATTCTTTGTCATATGTGTATCAGAGGAGCACCACTGCCATATCTGTTGTTGCTCCGGTCTGTTATGCTCACCTGGCAGCAACTCAGCTCGGACAGTTCTTGAAATTTGAGGACAGGTCTGACACTTCGAGCCATGGTGGCCAGTCTTCTGCTTCTGGCGGTGGTGCTGTTCCTCAGTTGCCACCACTGCAGGAAAATGTCTGCAACTCCATGTTCTTCTGTTGA 2745 0.4335 MDSFEPNGNGNDDSLPPPPPPPEVPPNVVPVKAEELPPEPVKKKPSRVPIARRGLGSKGSKLQLLTNHFKVDVNNKDGHFFHYSVALFYEDGRPVEGKGVGRKVIDRVQETYSSELAGKDFAYDGEKSLFTVGALPRNKLEFTVVLEDIISNSRNNGNCSPDGHGSPNEGDRKRMRRPNRAKTFKVEISFAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPYSLDWNKAKKTLKNLRITTSPSNQEYKICGLSELPCRQQTFTLKGKGGDESAEEITVFDYFSKYRNIELRYSADMPCINVGKPKRPTYFPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMRVLSDVLKVSKYDSDPLLQSCAVRINTGFTQVDGRVLPAPRLKFGNGEEFNPRNGRWNFNNKTFAQPTKIERWAVANFSARCDVKSLVKDLTRCAGNKGIQIDPPFDVFEESPQFRRAPPMVRVDKMFEDIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIINQCMCPQRVNDQYLTNVLLKINAKLGGINSFLSVEKTPSIPIVSKAPTIILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVDFYQSSGNRKPDNIIIFRDGVSESQFTQVLNIELSQIIEACKFLDEQWNPKFVVIVAQKNHHTKFFQNGSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQLGQFLKFEDRSDTSSHGGQSSASGGGAVPQLPPLQENVCNSMFFC 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02195 914 FunFam Protein argonaute 7 279 402 - -
Accr4g02195 914 Pfam PAZ domain 288 414 IPR003100 GO:0005515
Accr4g02195 914 CDD PAZ_argonaute_like 284 397 - -
Accr4g02195 914 Pfam Argonaute linker 1 domain 234 282 IPR014811 -
Accr4g02195 914 Pfam N-terminal domain of argonaute 61 222 IPR032474 -
Accr4g02195 914 Pfam Piwi domain 568 875 IPR003165 GO:0003676
Accr4g02195 914 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 42 877 - -
Accr4g02195 914 Gene3D paz domain 278 402 - -
Accr4g02195 914 ProSiteProfiles PAZ domain profile. 309 398 IPR003100 GO:0005515
Accr4g02195 914 SMART Piwi_a_2 567 875 IPR003165 GO:0003676
Accr4g02195 914 SMART DUF1785_2 232 284 IPR014811 -
Accr4g02195 914 MobiDBLite consensus disorder prediction 1 53 - -
Accr4g02195 914 SUPERFAMILY PAZ domain 279 438 IPR036085 GO:0005515
Accr4g02195 914 Pfam Mid domain of argonaute 477 558 IPR032473 -
Accr4g02195 914 Pfam Argonaute linker 2 domain 424 470 IPR032472 -
Accr4g02195 914 MobiDBLite consensus disorder prediction 155 178 - -
Accr4g02195 914 FunFam Protein argonaute 3 635 914 - -
Accr4g02195 914 CDD Piwi_ago-like 442 869 IPR045246 -
Accr4g02195 914 SUPERFAMILY Ribonuclease H-like 551 873 IPR012337 -
Accr4g02195 914 MobiDBLite consensus disorder prediction 879 898 - -
Accr4g02195 914 Gene3D - 634 914 IPR036397 GO:0003676
Accr4g02195 914 Gene3D - 462 628 - -
Accr4g02195 914 MobiDBLite consensus disorder prediction 12 33 - -
Accr4g02195 914 ProSiteProfiles Piwi domain profile. 567 875 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02195 Accr-Chr4 31158155 31165140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02195 52 914 Eukaryotic Initiation Factors Gene Family AT5G43810 36.080 1.20e-167 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02195 K11593 - qsu:111991924 1497.26