Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02182 ATGGAAGCTCAGTTACCGCTCAACACTGAAGGAAAGCCTATTCAATGCAAAGCCGCCGTCTGTCGGGATTCCGGTGAGCCGTTAGTGATCGAAGATGTTGTTGTAGCGCCGCCGATGTCTGGTGAAGCTCGTATTCGTATAATCTGCACTTCTCTCTGTCACAGTGACCTCACGTTTTGGAAGGCGAAGGGTCCTCGTGGGCTTTTCCCAAGAATTCTGGGCCACGAGGCCGTCGGGGTTGTGGAAAGTGTAGGAGAAGATGTGAGTGAAGTTAAGAAAGGAGATATGGTGATTCCAGTGTTCATGGCAGAATGCTTGGAATGTGTGGACTGCAAGTCAAAGAAGAGCAATCTGTGTTCAAATGTGCCATTTAGAATGTCTGGTTTCATGCCTAGACATGAAAGCAGCAGATTCACAGACCTCAGTGGCGAAACTATTCACCATTTCTTGTTTGTGTCAAGCTTCAGCCAATACACGGTGGTTGATGTTGTTCACTTGACTAAGATTAGTGATCCCTCCTCTCTTCCTCCCAACAGGGCTTGCCTCCTCAGTTGTGGTGTTTCTACTGGGGTAGGTGCTGCTTGGAAGACAGCAGAAGTGGAGGCAGGTTCTACAGTTGCCATATTTGGGCTCGGTTCCATTGGATTGGCGGTTGCAGAGGGAGCTAGACTTTGTGGAGCTGCTAAGATCATTGGGGTGGACTTGAACCCACAAAAATTTGAAATTGGAAAAAAGTTTGGACTCACAGACTTCGTCAATCCTGGAGAATGTGGGGACAAACCTGTTAGCCAGGTGATTAAAGAGATGACAGATGGAGGTGCTGACTATTGCTTTGAATGCGTTGGGATGGCATCTTTGGTGCATGAAGCCTATGCTTCTTGTCGCAAGGGTTGGGGGAAAACAATAGTTGTGGGAGTTGACCAGTTAGGGTCGAATTTGACCTTCAGCTCAGGGGAAGTTCTCACGAGTGGGAAATGCATCATGGGATCTTTATTTGGAGGACTCAAACCCAAATCTCATATCCCTATTCTTCTCAAGCGATACATTGATAAGGAACTGCAGCTGGATGATTTCGTGACACACGAAATGGAACTTGAGGACATAAATAGAGCTTTTGATTTATTGCAAGCAGGTCAGTGTCTTCGGTGTGTGATTTGGATGGACAAGAAATTCTGA 1176 0.4677 MEAQLPLNTEGKPIQCKAAVCRDSGEPLVIEDVVVAPPMSGEARIRIICTSLCHSDLTFWKAKGPRGLFPRILGHEAVGVVESVGEDVSEVKKGDMVIPVFMAECLECVDCKSKKSNLCSNVPFRMSGFMPRHESSRFTDLSGETIHHFLFVSSFSQYTVVDVVHLTKISDPSSLPPNRACLLSCGVSTGVGAAWKTAEVEAGSTVAIFGLGSIGLAVAEGARLCGAAKIIGVDLNPQKFEIGKKFGLTDFVNPGECGDKPVSQVIKEMTDGGADYCFECVGMASLVHEAYASCRKGWGKTIVVGVDQLGSNLTFSSGEVLTSGKCIMGSLFGGLKPKSHIPILLKRYIDKELQLDDFVTHEMELEDINRAFDLLQAGQCLRCVIWMDKKF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02182 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Accr4g02182 391 SUPERFAMILY GroES-like 338 386 IPR011032 -
Accr4g02182 391 Pfam Alcohol dehydrogenase GroES-like domain 41 166 IPR013154 -
Accr4g02182 391 Gene3D - 190 330 - -
Accr4g02182 391 PANTHER ALCOHOL DEHYDROGENASE 11 385 - -
Accr4g02182 391 SUPERFAMILY GroES-like 9 202 IPR011032 -
Accr4g02182 391 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 330 - -
Accr4g02182 391 FunFam Alcohol dehydrogenase 6 19 202 - -
Accr4g02182 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 350 IPR036291 -
Accr4g02182 391 Pfam Zinc-binding dehydrogenase 214 334 IPR013149 -
Accr4g02182 391 Gene3D - 19 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02182 Accr-Chr4 30958949 30968732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02182 41 375 Monolignol Biosynthesis Gene Families AT2G21730 24.852 3.00e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02182 K00121 - qsu:112018306 606.675