Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02179 ATGGAAATTGTTCGATCTCACGTCCATCGGAATATCCCCACCGATGATGCTGTTAACACCCTCCCACTCTATCGTTCTGCCCCACCGCTTGAAGTCAGACTCGAGGATTTCGAGCTATACGCCATGGATCGTCTTCGAGTTCTCAAGGGGATTTCTGATGGTTTATCTCGAGGGAAGAAACCAGAAGAAATGGATCAATTAGTAAACAATTTATGGAAAACGCATATGAGGCATCAACAGGCATCTGAAGTTGTAAATAAGGATATTATATCTCATTTTGTTCTACGGCTAGTGTATTGCCGAACTGAGGACTTGAGGAAATGGTTCCTGTCTATGGAAACTTCACTATTTCGCTACCGATTTCGTCGTGAAAATGCTGAAGCTCAGAGGGCAACCATGGCAGAATTCAACCTTCCTTACAAGGCTGTTAACCATGTGGAATTTGAGAGAGTGAAGGACAAATTGGAACAAGTTGCACGGTCCATTGGCCAGCCTCTACGTGACAATGACACTATATTCTACAAGGTACCATTTGAAGAAGTTCCTGAGCTCGTGGCTGGTCGGAAAGTATTTATAAATCAAGGTTATGCTTATGTTGGAATGAATCAGGTTGTCTCACTGGTAGCCACACTATTCCGCAGTCAGCTATCGAAAGCACTCATACTCACAAACAGAAAATGGACATCTACAATTAGAGAACAAGAAAAACATAGATTGACTCCTATTGTGGAAGCCCTGTGTTCAAGTTATCTAGGTCCTGACTATTCTCAGCCAAGGGAGTACGCTCAAATATCATTAAAGGATATTGATCAAGTTGCTAAGAGTTCATTCCCATTGTGCATGCGTCATCTATTTGAAAAGCTGAGAGAGGATCACCATTTAAAGCATGGAGGGAGGATGCAACTAGGTCTCTTTCTCAAGGGTGTTGGTCTGAATCTGGATGATGCACTTGCATTTTGGAGACATGAATTCTCTCAAAAGGTTGGGCTGGAGAGGTTTGAGAAAGAGTATGCATACAGCATACGCCATAATTATGGAAAGGAGGGGAAGAGAACTGACTATAGTCCCTATTCTTGTCAAAAGGTTATTTCATCAACTCCTGGTGTTGGAGATCATCATGGATGCCCCTATCGACATTTCAGTGAGGAGAATCTTCGAGCTGCTCTTAACAGAATGGGGGTGAATGGTCGAGCAATCGAAGACGTAATGGACAAAGTACGAAATAGACATTATCAGCTGGCTTGCACCCTGACATTTGAAGCTATTCATGGCATGCAATGTGATGCGGGGATTAACCATCCAAATCAGTACTTCAGTGACAGCCAAAAGATATTGAAGCCAAAGGCGCAGGATCCTCCGAACGCATCCTAA 1371 0.4318 MEIVRSHVHRNIPTDDAVNTLPLYRSAPPLEVRLEDFELYAMDRLRVLKGISDGLSRGKKPEEMDQLVNNLWKTHMRHQQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETSLFRYRFRRENAEAQRATMAEFNLPYKAVNHVEFERVKDKLEQVARSIGQPLRDNDTIFYKVPFEEVPELVAGRKVFINQGYAYVGMNQVVSLVATLFRSQLSKALILTNRKWTSTIREQEKHRLTPIVEALCSSYLGPDYSQPREYAQISLKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRHEFSQKVGLERFEKEYAYSIRHNYGKEGKRTDYSPYSCQKVISSTPGVGDHHGCPYRHFSEENLRAALNRMGVNGRAIEDVMDKVRNRHYQLACTLTFEAIHGMQCDAGINHPNQYFSDSQKILKPKAQDPPNAS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02179 456 PANTHER DNA PRIMASE LARGE SUBUNIT 17 448 IPR007238 GO:0006269
Accr4g02179 456 Pfam Eukaryotic and archaeal DNA primase, large subunit 173 438 IPR007238 GO:0006269
Accr4g02179 456 PIRSF DNA_primase_large 4 456 IPR016558 -
Accr4g02179 456 FunFam DNA primase large subunit 5 246 - -
Accr4g02179 456 Gene3D - 4 246 - -
Accr4g02179 456 CDD PriL_PriS_Eukaryotic 23 441 IPR016558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02179 Accr-Chr4 30868992 30880211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02179 1 453 Core DNA Replication Machinery Family AT1G67320 66.191 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02179 K02685 - gmx:100806321 771.541