Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02164 ATGGGCTCGACTGCATTATTGCTTTTGAAACTAGCATTATTGGCGGCCTACTACACACCAGCGGCGGTGCCAGCTCCGGCACGGCTGGCGCATTGCATTCAGAAGTGCGGGAACGTGGATATCTCCTATCCCTTTGGTACGAAGGAAGGTGACTGCTTCAAAGATCGTGATTTTCAAATAGACTGCAGACAGAAGAATTCGAACGGACAGCGCACTCCGTACCTAGCAAAAGAATCCCATGACGATCACGACATCGAGGTTCTCAAAATCTCTGAGGATACTAGTGAGATTTATGTCTCTATGCCTGTTTCTTATGTTTGCTACGATCCCAACAATAGCACCGATTACCATCAGAAGGATCGTTTTCATATGCCTTCCAAGTTTGGCATATCCAATAAAAAGAACAAGTTCTTCGTACGGGGCTGTGAAACCTACGCGTTCCTCTATGACCATAAAGGAAAAAGACTTAACGGCTGCGACACTAGGTGTAGTGACGACGAGAGTTCTTCAGTGACGAGTAATTATGGAACGTGCCAGAGTGATTTTGAGCTAACCGTTGCAAATTATACTATTAATATTATTTTTTACGATAGATTTGACGAGAGTGATTCATCAGTGAGGAGGTGCAGCTATGCATTTGTTGCACAGATCGGATCTTTCAACGATTCCGACCTCAACGACCTCAAGAAGATAAGAGAAACTTACAGATCTACGGTGGTTCTCGATTGGGCTGTTCATAACACGAATTCATGTGGTGGAGCCTGCAAAAGTAATAATGCTGAGTGCGTACCATCAGAAAGTGTCAGTGGCCAGTACTTCTGCAAATGTAAACAAGGGTTCCGTGGCAACCCCTACAGGGTCGACGGCTGCAAAGATGTGGATGAGTGCCAGGACAGCAACTTAAACAAGTGCTTGCATCCGAAGAGTTGCCGAAATACGGATGGAGACTACAAATGTTCTTGTCCAAGTGGACAAAAAGGCAATGGCCGCGATCAAACTGTAGGAGGCTCAGGCTGTAGCCCTATCATCACAATTCCATTAGTTGTTACTATAGTTTTGTTGGGTGTCTTCACACTGGTCTTCATATTGTGTTGGGCACACAAGCAAAGAACTTCGAAACAACTGAGACAGAGAAACTTTGAGCAAAATGGTGGAAACTTCCTTCTACAACAACTTTCACAACAACAAAGATACACTGACAAAATGAGAATATTTACAGAAGTTGAGCTTAAGAATGCCACAAACAACTTTGATGAAACTAGGATTCTGGGTCGTGGAGGACAAGGCACAGTTTATAAAGGTACATTGTCAGATAACACATTTGTTGCTATTAAGAAGTCTAGAGTTGGAGGGGATCCTCGACATATTCAAAGTTTTATCAATGAAGTGTTTGTGCTTTCCCAAATCAACCATAGGCATGTGGTCAAACTTCTGGGATGTTGTCTTGAGACTGAAGTGCCCTTATTAGTTTATGAGTTTGTAGATAACGGATCACTTCTTGACCACCTAGACCAATCAGAAAATGAATGTTCTATTACATGGGACACTCGGTTAAGAATAGCTACAGAAACTGCTGGGGCCATTTCATATTTACTCTCTTCTGCTTCAATTCCAATTATCCATCGTGATATTAAATCTGCAAACATACTTTTAGACCACAATGACACAGCAAAGGTGTCTGATTTTGGAGCTTCAAGACTTGTCCATCTTGATGAAGCTCAAGTTGCCACTATAGTTCAGGGAACAATAGGATACCTGGATCCAGAGTACCTTCAGACAGGTCTATTGAATGAGAAGAGTGATGTCTATAGTTTTGGGATTGTACTCGTGGAGCTACTCACAGGGAATAAAGCTTTTGAATTCAATACTTTGGCTAAATATTTTGTGTCTTCAATGAGAGAAGACCGCTTGTGGGAAATTCTTGATAAACGAGTGCTGGACCAGAAGAAGAATGCAATGATTTTGAAGGAAGTTGCCTCATTGGCAAGAAGATGCATTAGAGTCAATGGAGAGGAAAGACCAACCATGAAGGAAGTAGCAATGGAGTTAGAAGGTCTAATAACAATGGGAAAGCATCTTCAAGAGAAGGACAAGGATATGATGGTAGAAGAAAGTGAATACTTATTGGGTTATTGTACAAATAATGATGGATATGGTAGTACCAGTGCTAGTTTTTCAGTTATTAGTGGTCATGATGATAGCATACAAAAGCATGTAACATTTGATATTATAGATGGAGGGAGATGA 2247 0.4166 MGSTALLLLKLALLAAYYTPAAVPAPARLAHCIQKCGNVDISYPFGTKEGDCFKDRDFQIDCRQKNSNGQRTPYLAKESHDDHDIEVLKISEDTSEIYVSMPVSYVCYDPNNSTDYHQKDRFHMPSKFGISNKKNKFFVRGCETYAFLYDHKGKRLNGCDTRCSDDESSSVTSNYGTCQSDFELTVANYTINIIFYDRFDESDSSVRRCSYAFVAQIGSFNDSDLNDLKKIRETYRSTVVLDWAVHNTNSCGGACKSNNAECVPSESVSGQYFCKCKQGFRGNPYRVDGCKDVDECQDSNLNKCLHPKSCRNTDGDYKCSCPSGQKGNGRDQTVGGSGCSPIITIPLVVTIVLLGVFTLVFILCWAHKQRTSKQLRQRNFEQNGGNFLLQQLSQQQRYTDKMRIFTEVELKNATNNFDETRILGRGGQGTVYKGTLSDNTFVAIKKSRVGGDPRHIQSFINEVFVLSQINHRHVVKLLGCCLETEVPLLVYEFVDNGSLLDHLDQSENECSITWDTRLRIATETAGAISYLLSSASIPIIHRDIKSANILLDHNDTAKVSDFGASRLVHLDEAQVATIVQGTIGYLDPEYLQTGLLNEKSDVYSFGIVLVELLTGNKAFEFNTLAKYFVSSMREDRLWEILDKRVLDQKKNAMILKEVASLARRCIRVNGEERPTMKEVAMELEGLITMGKHLQEKDKDMMVEESEYLLGYCTNNDGYGSTSASFSVISGHDDSIQKHVTFDIIDGGR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02164 748 Pfam Protein tyrosine and serine/threonine kinase 420 683 IPR001245 GO:0004672|GO:0006468
Accr4g02164 748 CDD EGF_CA 292 327 - -
Accr4g02164 748 SMART serkin_6 417 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02164 748 Gene3D Transferase(Phosphotransferase) domain 1 494 708 - -
Accr4g02164 748 Pfam Calcium-binding EGF domain 292 330 IPR001881 GO:0005509
Accr4g02164 748 SUPERFAMILY Growth factor receptor domain 154 328 IPR009030 -
Accr4g02164 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 310 321 IPR000152 -
Accr4g02164 748 FunFam Fibrillin 2 287 333 - -
Accr4g02164 748 ProSiteProfiles EGF-like domain profile. 292 331 IPR000742 -
Accr4g02164 748 FunFam Wall-associated receptor kinase 2 494 706 - -
Accr4g02164 748 Gene3D Phosphorylase Kinase; domain 1 388 493 - -
Accr4g02164 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 687 IPR045274 GO:0007166
Accr4g02164 748 SUPERFAMILY Protein kinase-like (PK-like) 395 683 IPR011009 -
Accr4g02164 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Accr4g02164 748 ProSitePatterns Calcium-binding EGF-like domain signature. 292 319 IPR018097 GO:0005509
Accr4g02164 748 FunFam Wall-associated receptor kinase 2 387 493 - -
Accr4g02164 748 ProSiteProfiles EGF-like domain profile. 247 291 IPR000742 -
Accr4g02164 748 SMART egf_5 295 340 IPR000742 -
Accr4g02164 748 SMART egf_5 250 291 IPR000742 -
Accr4g02164 748 SMART egfca_6 292 340 IPR001881 GO:0005509
Accr4g02164 748 SMART egfca_6 247 291 IPR001881 GO:0005509
Accr4g02164 748 ProSiteProfiles Protein kinase domain profile. 417 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02164 748 CDD STKc_IRAK 423 686 - -
Accr4g02164 748 Gene3D Laminin 246 334 - -
Accr4g02164 748 Pfam Wall-associated receptor kinase galacturonan-binding 32 99 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02164 Accr-Chr4 30466738 30471723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02164 1 746 Receptor kinase-like Gene Family AT1G21230 42.412 5.56e-176 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g02164 PK_Tyr_Ser-Thr 6.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02164 - - pcin:129317315 858.211