Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02163 ATGGGCTCGAGTGCATTATTGCTTTTGAAACTGGCATTATTGGCGGCCTACTACACGCCCACGGCGGTGCCAGCTGCCGTACCGCCGGCGAATTGCGCAAAAAAATGCGGGAGCGTGGATATCCCCTATCCCTTTGGCACGATGAAAGGCTGCTTCAAAGATCCTGATTTTCAAATAAACTGCACACGCTCTTCTAACGGACACAGCATTCCGTACCTAGCAAAAAAATCCTATGACGTTCACGACATCGAGGTTCTCAAGATCTCTGAGGATACTAGTGAGATTTCTGTCTCTATGCCTGTTTCTATTTTGTCCTACCATCCCAAGAATAGAGACTCTGAAGGCTACGCTATGTTTGATATTTTTCAGATGCCTTCCAAGTTTGGCATTTCCAATAAAAAGAACAGGTTCTTCGTACTGGGCTGTGACACCTACGCGTTCCTCTATGACCAGGAAGGAAAGAGACTGAACGGCTGCAACGTGCTGTGCTTTGACGACCGGAGTTCTTCAGGGACGAGTAATAATGAAACGTGCGATAGTGATTTTCAGCTAACCGTTGCAAATTATTCTATTCGTATTATTGGTTACGGTATAAATCCATCAGTGACCAAAAAAAGGTACAGCTATGCATTTGTTGCACAGATCGGATCTTTCAACAATTCCGACCCCAAAGACCGCAAGAAGATAAGAGAAACTAACACATCTAAGGTGGTTCTCGATTGGGCTGTTGATAGTACGAATTCATGTGGTGGAGCCTGCAAAAGTAATAATTCTGGGTGCGTACCATCAGAAAGTGTCAGTGGCCAGTACTTCTGCAACTGTACACAAGGGTTCCGTGGCAACCCCTACAGTTACAGGGTCGACGGCTGCAAAGATGTGGATGAGTGCCACGACGACAGCAACTTAAACAAGTGCTTGCATCCGAATAGTTGCCGAAATACGGATGGAGACTACAAATGTTCTTGTCCAAGTGGACAAAAAGGCAATGGCCGCGATCAAACTGTAGTAGGAGGCTCAGGCTGTAGCCCTATCATCACAATTCCATTAGTTGTTACTATAGCTTTGTTGGGTGTCTTCACACTGGTATTCATATTGTGTTGGGCACACAAGCGAAGAACTTTGAAACAACTAAGACAGAGAAACTTTGAGCAAAATGGTGGAAACTTGCTTCTACAACAACTTTCACAGGAACAAAGATACACTGATAAAACTAGAATATTTACAGAAGTTGAGCTGAAGAATGCCACAAACAACTTTGATGAAACTAGGATTCTTGGTCGTGGAGGACAAGGCACAGTTTATAAAGGTACATTGTCAGATAACACACTTGTTGCTGTTAAGAAGTCTAGAGTTGGAGGGGATCCTCAACATATTAAAAGTTTTATCAATGAAGTGTTTGTGCTTTCCCAAATCAACCATAGGCATGTGGTCAAACTTTTAGGTTGTTGTCTTGAGACTGAAGTGCCCTTGTTAGTTTATGAGTTTGTAGATAACGGCTCACTTCTTGACCACCTAGACCCATCAGAAAATGAATGTTCTATTACATGGGACACTCGGTTAAGAATAGCTACAGAAACTGCTGGGGCCATTTCATATTTACACTCTTCTGCATCAATTCCAATTATCCATCGCGATATTAAATCTGCAAACATACTTTTAGACCACAACAACACAACAAAGGTGTCTGATTTTGGAGCTTCAAGACTTGTCCATCTTGATGAAGCTCAAGTTGCCACTGTAATTCAGGGGACAATAGGATACCTGGATCCAGAGTACCTTCAGACAGGTCTGTTGAATGAGAAAAGTGATGTTTATAGTTTTGGGATTGTACTCGTGGAGCTACTTACAGGGAATAAAGCTTTTCAATTCAATACATTGGCTAACTATTTTGTGTCGTCAATGAAAGAAGACCGCTTGTGGGAAATTCTTGATAAACGAGTGCTAGACCAGAAGAAGAATGCAATGATTTTGAACGAAGTTGCCTCATTGGCAAAAAGATGCATTAGAGTTAGTGGAGAGGAAAGACCAACCATGAAGGAAGTAGCAATGGAGTTAGAAGGTCTGATGGCAAAGGGAAAGCATCTTCATGAGAAGGACAAGGATATGATGGAAAAAGAAAGTGAATACTTATTGGGATATTGTCCAAATAATGATGGCTACGGGAGTACCAGTGCTAGTTTTTCAGTTACTAGTGGCCATGATAGCATACAAAAGCATGTTGCATTTGATATTATAGATGGGGGGAGATGA 2250 0.4222 MGSSALLLLKLALLAAYYTPTAVPAAVPPANCAKKCGSVDIPYPFGTMKGCFKDPDFQINCTRSSNGHSIPYLAKKSYDVHDIEVLKISEDTSEISVSMPVSILSYHPKNRDSEGYAMFDIFQMPSKFGISNKKNRFFVLGCDTYAFLYDQEGKRLNGCNVLCFDDRSSSGTSNNETCDSDFQLTVANYSIRIIGYGINPSVTKKRYSYAFVAQIGSFNNSDPKDRKKIRETNTSKVVLDWAVDSTNSCGGACKSNNSGCVPSESVSGQYFCNCTQGFRGNPYSYRVDGCKDVDECHDDSNLNKCLHPNSCRNTDGDYKCSCPSGQKGNGRDQTVVGGSGCSPIITIPLVVTIALLGVFTLVFILCWAHKRRTLKQLRQRNFEQNGGNLLLQQLSQEQRYTDKTRIFTEVELKNATNNFDETRILGRGGQGTVYKGTLSDNTLVAVKKSRVGGDPQHIKSFINEVFVLSQINHRHVVKLLGCCLETEVPLLVYEFVDNGSLLDHLDPSENECSITWDTRLRIATETAGAISYLHSSASIPIIHRDIKSANILLDHNNTTKVSDFGASRLVHLDEAQVATVIQGTIGYLDPEYLQTGLLNEKSDVYSFGIVLVELLTGNKAFQFNTLANYFVSSMKEDRLWEILDKRVLDQKKNAMILNEVASLAKRCIRVSGEERPTMKEVAMELEGLMAKGKHLHEKDKDMMEKESEYLLGYCPNNDGYGSTSASFSVTSGHDSIQKHVAFDIIDGGR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02163 749 SUPERFAMILY Protein kinase-like (PK-like) 398 685 IPR011009 -
Accr4g02163 749 SMART egfca_6 292 342 IPR001881 GO:0005509
Accr4g02163 749 CDD STKc_IRAK 425 688 - -
Accr4g02163 749 FunFam Wall-associated receptor kinase 2 496 708 - -
Accr4g02163 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 691 IPR045274 GO:0007166
Accr4g02163 749 FunFam Fibrillin 2 287 334 - -
Accr4g02163 749 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Accr4g02163 749 SUPERFAMILY EGF/Laminin 292 334 - -
Accr4g02163 749 ProSiteProfiles Protein kinase domain profile. 419 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02163 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Accr4g02163 749 Gene3D Transferase(Phosphotransferase) domain 1 496 711 - -
Accr4g02163 749 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
Accr4g02163 749 Gene3D Laminin 251 331 - -
Accr4g02163 749 Pfam Protein kinase domain 420 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02163 749 FunFam Wall-associated receptor kinase 2 389 495 - -
Accr4g02163 749 CDD EGF_CA 292 328 - -
Accr4g02163 749 ProSitePatterns Calcium-binding EGF-like domain signature. 292 320 IPR018097 GO:0005509
Accr4g02163 749 ProSiteProfiles EGF-like domain profile. 292 332 IPR000742 -
Accr4g02163 749 Gene3D Phosphorylase Kinase; domain 1 391 495 - -
Accr4g02163 749 SMART serkin_6 419 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02163 Accr-Chr4 30431294 30436563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02163 1 747 Receptor kinase-like Gene Family AT1G21230 41.268 1.20e-172 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr4g02163 Pkinase 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02163 - - pcin:129317315 825.854