Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02143 ATGCCTACCACCTGCATGATGGCAAACCTTATCTTTCATTTCTCCTTCATGTTCTTCGTGGTTTGCCGATGTTTATCTCACTCCAATTTTACAAATTCTGATAAATCGGCGCTTCTTGGTTTCAAATCATCTGTTAGGGATCCTTACAAGCACTTGGAAAACTGGTCCAATTCCTCTTCCATTTGCAACTGGTCTGGGATTACATGTGATTCTAAGCATGAGAGAGTGAGAATACTGAGTCTTGAAAAGATGGGTCTCCAAGGAACCTTACCAAAAGAGTTGCTTCAGTTTCAGAGGTTAGAAATTCTGAACTTGAGCTACAATGGATTTACAGGAGAAATTCCAAGTTGGATAGGAAGCTTATATACTCTTCAACACTTGGTTCTTGAAAATAATAGCTTTGAAGGTTTCATTCCTTCAACTATATCCAATTTGTCTAAGTTGGAGACCTTGAATTTGAATTCCAATTCTCTCCAGGGATCTATTCCCTTTAATATTGGAAGGCTTCAACATCTCAAAATCTTACGCCTTTCTCGGAACAAGCTTTCAGGAATTATTCCTCCAACCCTTTCTAACTTATCCTCACTTGAGTGGCTTGCTTTGTCTGTCAACGAATTGCAAGGGCATATTCCCATAGATATGAATAAGCTTACGAAGCTGAAAATTATATACTTGGAAGTTAATAAGTTGACTGGCCAAATACCAAGAAGTATTGGAAACTTGATCATGCTTCAAGAATTATATCTTGACCACAATTACTTGCAAGGCGACATTCCCAACGAAATTAGCAATCTTACAAGTGCGAATAAAATATACTTGAATGAGAATCAACTGTCTAGTCACATACCAAAAAGCATTGGAAAGCTGACTACGCTTCAAGAGCTATCTCTTGCCAATAATAACTTGGAAGGAAATATTTCCAATGAAATTGGAAGCTTGACAAATCTGAAGATTTTAGACTTATCGGTTAATAAACTATTTGGCCATATACCAAGAGGGATTGGGAACTTGACTACGCTTCAAGATTTAAATCTTGAAAGCAATGATTTAGAAGGCTCAATACCTAAGGAAATAGGCAATCTTCAACAGCTTAAGATTTTATCCTTGTATCAAAACAAGTTGAGCGAATCAATTCCATCAGAAATTCTCAACATCTCGACTTTGAAAGTCTTGTCTCTCCAAGACAATTCTCTATCGGGAATTCTTCCATCAGATTTTGGATATGGCCTTTCTAATCTACAAATTTTGTATTTATGGGGCAACAAACTTTCCGGAAGCATCCCCAATACAATATCCAATGCTTCAAAGCTAACCGTTGTAGAATTGCAGCAGAATAATTTTGAAGGGGTTTTACCAAATACACTTGGGCATTTAATATACTTAGAAACCCTTCAAGTATATGGCAACAATTTCACCATAATAGATGCTTCAAATTCTGAAACTGGCTTTTTTAGCTCGTTGTCAAATTGTAGGCATTTGGAAACTCTGGTTCTCTCAAAAAATCCATTGCATATGAAACTTCCCAAGTCCATTGGAAACTTATCTGATTCTCTTCAGACGCTGAAGATGGACTCTTGCGAGATTAATGGTAACATACCATCAGAAATTGGGAATCTCTCTAGCTTGTTTGAGCTATCTTTTGCTGAAAATTTTTTAAATGGATCAATTCCTCCAACAATTAGCAGCTTACAGGCTCTTCAGCGTTTGAATCTTGTGAGCAATGAGCTAGATGGTTTGATTGTTGATGAGCTTTGTGACATTAGAAGACTTGGATATTTATATCTATCTGGAAACAAGCTTTCTGGAGCAATGCCACCTTGCTTAGGAAACCTTATGTCCCTGCAAGAACTTGACCTGAGCTCCAATAAGTTGATTTCCGAGATACCTTCTTCCTTTTGGAATTTGACAGGTATACTACAGGTAGACCTATCTTACAACATGTTAGTTGGAAATCTTTCATTGAAGATTGGGAACATGAAAGCTCTTGTTCTATTAGATTTTTCAAGAAATCATATTTCAGGCATCATTCCCACAACCATAGGTAACTTGCAAAATTTGCAAATTTTCTCCTTAGGACACAACATGTTGCAAGGGACAATCCCTGAATCACTTGGTGATTCACTAAGCTTAGAAAAGCTAGATCTTTCCCAAAATAATTTGTCTGGTGATATTCCCATATCGCTAGCATCACTTAGATCCCTTAAGTATGTCAATCTCTCTTATAACCAACTACAAGGTGAGATTCCAAGTGGCGGGGTTTTCAAAGATTTGACGGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTCGTCAGCCAAAAATGCAAGTTCCTCCATGCAGAAAAGGAAAAAGAAAAAGGTCATCAATGGCAAAATTGATTTTGTTGGAATGCATACTACCAATAGTTTTGTCAACAATTTTGGTAGTTTCACTCGTTATCCTCTTTCAACGCAAACGAATGCATGCCATGGAACAGGATTTATCATTTTTAGGAATGCCAAGAAGGATTTCCTATTATGAGATTTTGGATGCAACCAATAGATTTGATGAGAGTAACTTACTTGGAAAGGGGAGTTTTGGTTCTGTATTCAAAGGAACGCTTTCAAGTGGAATAGTTGTTGCTTTTAAAATATTCAATTTTGATTCAGAAGCGTTGTCAAGGAGCTTTGAAGTGGAATGTGACACAATGCGTAATATGCGTCATCGCAATTTGGTAAAGATCATAAGTAGTTGTTCCAATGATGATTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGAAGTCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTGCAAAGGATAAATATAATGATAAATATTGCATCTGCTTTGGAATATCTCCATCAAGGCTTGCCAACACCAATAGTCCACTGTGATTTGAAGCCAAGTAACATTTTGATGGATGATAACATGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAGTTTTTAGATGAAGGGAAATCTAAGACACATACAGAGACATTGGCTACAATTGGTTACATTGCACCTGAATATGGATCATTTGGAATTGTTTCAACAAAAGTAGACGTGTACAGCTACGGAATAATTCTAATGGAAGTATTCACAAGAAAAAGGCCAACAGAAGATATTTTTGTGGGTGGATTGAGCTTGAAGAGTTGGGTAAGTGAATCATTGTCACCTGCTTTATCAACTCAAGTCATAGATTCCAATTTATTAGAAGGAGACGAACAAAATATTAGTAATATTTTGACAACTACATCCTCTGTTCTTGAATTGGCCTTGAATTGTTGCGCCAACTCTCCACAAAGGCGTTGCAATATGTCACATGTTGTGGTTTCACTAAACAAGATCAAGGACTTGTTTATGCAAACATGTCATTGGAAGAAATACTGA 3417 0.3673 MPTTCMMANLIFHFSFMFFVVCRCLSHSNFTNSDKSALLGFKSSVRDPYKHLENWSNSSSICNWSGITCDSKHERVRILSLEKMGLQGTLPKELLQFQRLEILNLSYNGFTGEIPSWIGSLYTLQHLVLENNSFEGFIPSTISNLSKLETLNLNSNSLQGSIPFNIGRLQHLKILRLSRNKLSGIIPPTLSNLSSLEWLALSVNELQGHIPIDMNKLTKLKIIYLEVNKLTGQIPRSIGNLIMLQELYLDHNYLQGDIPNEISNLTSANKIYLNENQLSSHIPKSIGKLTTLQELSLANNNLEGNISNEIGSLTNLKILDLSVNKLFGHIPRGIGNLTTLQDLNLESNDLEGSIPKEIGNLQQLKILSLYQNKLSESIPSEILNISTLKVLSLQDNSLSGILPSDFGYGLSNLQILYLWGNKLSGSIPNTISNASKLTVVELQQNNFEGVLPNTLGHLIYLETLQVYGNNFTIIDASNSETGFFSSLSNCRHLETLVLSKNPLHMKLPKSIGNLSDSLQTLKMDSCEINGNIPSEIGNLSSLFELSFAENFLNGSIPPTISSLQALQRLNLVSNELDGLIVDELCDIRRLGYLYLSGNKLSGAMPPCLGNLMSLQELDLSSNKLISEIPSSFWNLTGILQVDLSYNMLVGNLSLKIGNMKALVLLDFSRNHISGIIPTTIGNLQNLQIFSLGHNMLQGTIPESLGDSLSLEKLDLSQNNLSGDIPISLASLRSLKYVNLSYNQLQGEIPSGGVFKDLTAESFMMNKALCGRQPKMQVPPCRKGKRKRSSMAKLILLECILPIVLSTILVVSLVILFQRKRMHAMEQDLSFLGMPRRISYYEILDATNRFDESNLLGKGSFGSVFKGTLSSGIVVAFKIFNFDSEALSRSFEVECDTMRNMRHRNLVKIISSCSNDDFKCLIMEFIPNGSLEKWLYSHNYCLDFLQRINIMINIASALEYLHQGLPTPIVHCDLKPSNILMDDNMVAHVSDFGIAKFLDEGKSKTHTETLATIGYIAPEYGSFGIVSTKVDVYSYGIILMEVFTRKRPTEDIFVGGLSLKSWVSESLSPALSTQVIDSNLLEGDEQNISNILTTTSSVLELALNCCANSPQRRCNMSHVVVSLNKIKDLFMQTCHWKKY 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02143 1138 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 31 188 - -
Accr4g02143 1138 Gene3D Ribonuclease Inhibitor 234 328 IPR032675 -
Accr4g02143 1138 ProSiteProfiles Protein kinase domain profile. 849 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02143 1138 FunFam Inactive leucine-rich repeat receptor-like protein kinase 212 473 - -
Accr4g02143 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Accr4g02143 1138 FunFam Inactive leucine-rich repeat receptor-like protein kinase 485 780 - -
Accr4g02143 1138 SUPERFAMILY Protein kinase-like (PK-like) 828 1128 IPR011009 -
Accr4g02143 1138 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Accr4g02143 1138 SUPERFAMILY RNI-like 342 750 - -
Accr4g02143 1138 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Accr4g02143 1138 Pfam Leucine rich repeat 588 648 IPR001611 GO:0005515
Accr4g02143 1138 Pfam Leucine rich repeat 685 744 IPR001611 GO:0005515
Accr4g02143 1138 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 481 1123 - -
Accr4g02143 1138 Pfam Protein kinase domain 850 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02143 1138 Gene3D Ribonuclease Inhibitor 31 233 IPR032675 -
Accr4g02143 1138 SMART LRR_typ_2 169 192 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 193 217 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 410 434 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 611 634 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 683 707 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 659 682 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 731 756 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 97 121 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 241 265 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 361 385 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 313 337 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 145 168 IPR003591 -
Accr4g02143 1138 SMART LRR_typ_2 539 563 IPR003591 -
Accr4g02143 1138 ProSiteProfiles Leucine-rich repeat profile. 613 635 IPR001611 GO:0005515
Accr4g02143 1138 Gene3D Ribonuclease Inhibitor 329 476 IPR032675 -
Accr4g02143 1138 SMART LRR_sd22_2 683 706 - -
Accr4g02143 1138 SMART LRR_sd22_2 169 195 - -
Accr4g02143 1138 SMART LRR_sd22_2 611 637 - -
Accr4g02143 1138 SMART LRR_sd22_2 410 436 - -
Accr4g02143 1138 SMART LRR_sd22_2 217 243 - -
Accr4g02143 1138 SMART LRR_sd22_2 289 308 - -
Accr4g02143 1138 SMART LRR_sd22_2 361 387 - -
Accr4g02143 1138 SMART LRR_sd22_2 313 339 - -
Accr4g02143 1138 SUPERFAMILY L domain-like 31 303 - -
Accr4g02143 1138 ProSiteProfiles Leucine-rich repeat profile. 709 732 IPR001611 GO:0005515
Accr4g02143 1138 Pfam Leucine Rich Repeat 315 337 IPR001611 GO:0005515
Accr4g02143 1138 Pfam Leucine Rich Repeat 171 193 IPR001611 GO:0005515
Accr4g02143 1138 Pfam Leucine Rich Repeat 412 433 IPR001611 GO:0005515
Accr4g02143 1138 Gene3D Ribonuclease Inhibitor 477 788 IPR032675 -
Accr4g02143 1138 SMART serkin_6 849 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02143 1138 ProSitePatterns Protein kinases ATP-binding region signature. 855 877 IPR017441 GO:0005524
Accr4g02143 1138 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 925 1134 - -
Accr4g02143 1138 Gene3D Phosphorylase Kinase; domain 1 832 924 - -
Accr4g02143 1138 Gene3D Transferase(Phosphotransferase) domain 1 925 1134 - -
Accr4g02143 1138 FunFam Serine-threonine protein kinase plant-type 831 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02143 Accr-Chr4 29824827 29854027 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02143 10 1126 Receptor kinase-like Gene Family AT5G46330 34.503 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr4g02143 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02143 - K13420 qsa:O6P43_031966 1112.83