Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02142 ATGAGGAAGAAACTCGATACTCGTTTCCCTGCCGCTCGGATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGAAATAACATTGAGAAGAGGGGCAAAGACAATGAATTCCTTTCATTTAAAACAATGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCCACACTGCTTCTGGAGATGACCGTACTATCTGTAAGAGAAGGAAAGTCGATGAAAATGGAAATGACAGTGACGATGACACAAAAAGAAATAAGATGTCAGAAAATGCACATCATGCTGGTGGTAGGGGAAGAGGTCGGGGCAGAGGCAGGGGTCGTGGCCGAGGAAGCAGAACAACAGATCGAGAGATTAACGCACACGTCAAGTCTGAAGATGATCACCATCATACGGATGGAATGAAGCACCATCACATGCACACTTACAGCAGTGAAAGCATGGAAATTAGTACAGAATATGAAGTGAAGCCTTCCATTGGCAAGACATCAGAAGCATGCTTTAAAAATTTTGACTTAAATATGGACCCTGTGGACTTGGACGGGGATGGGGATTCGCCAACCAGCAAAGCTCTTGTCCGACCTTGTCCTTCTGAAAAGCCTACTGCGACAACTTCTCCATTCCAAAAACCAGCTACAACTTTTCCATCTCAAAAACCAACTGTAGAATTGAAAAACGAAGAAATCCCCGGGTGGTCGTTGTCTGATGTGGGAAAAATGGCCATCGATCCTATCCAACTGGTCAACATGAATAGAAGAATGGATGAAGATGAAGACTATGATGAAGAAAGTTGA 903 0.4286 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHTASGDDRTICKRRKVDENGNDSDDDTKRNKMSENAHHAGGRGRGRGRGRGRGRGSRTTDREINAHVKSEDDHHHTDGMKHHHMHTYSSESMEISTEYEVKPSIGKTSEACFKNFDLNMDPVDLDGDGDSPTSKALVRPCPSEKPTATTSPFQKPATTFPSQKPTVELKNEEIPGWSLSDVGKMAIDPIQLVNMNRRMDEDEDYDEES 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02142 300 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Accr4g02142 300 MobiDBLite consensus disorder prediction 90 183 - -
Accr4g02142 300 MobiDBLite consensus disorder prediction 235 257 - -
Accr4g02142 300 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Accr4g02142 300 MobiDBLite consensus disorder prediction 221 259 - -
Accr4g02142 300 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Accr4g02142 300 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 126 - -
Accr4g02142 300 MobiDBLite consensus disorder prediction 145 180 - -
Accr4g02142 300 FunFam dr1-associated corepressor homolog 1 86 - -
Accr4g02142 300 MobiDBLite consensus disorder prediction 98 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02142 Accr-Chr4 29799418 29802971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02142 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 68.421 3.82e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr4g02142 CBFD_NFYB_HMF 1.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02142 K21752 - qsa:O6P43_020912 304.679