Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02125 ATGAGCAGTCGGATACTGTACATTTGCAAAGAAGAAGGGCTTAATCTTGATTCTGAGGCTCTTTCAACCCTTGGTTCCATTTCTCAAGGAGATCTTCGTAGGGCTATTACATACTTACAGTCAGCTGCCCGCTTATTTGGATCTTCAATTTCTTTAAAGGACCTGATTTCTGTCTCTCGGGTCATTCCAACTGAGGTTGTGCAAGCATTTCTTGCAACATGCAAAAGTGGTAATTTTGATTCAGCAAACAAGGAAGTCAATGATTTCATTGCAGAAGGATATCCGGTCTCTCAGTTCCTAACACAGTTATTTGAGGCCATTGTTGAAGCAGACGATATATCAGATGAACAAAAGGCTAGAATATCCAAGAAATTGGGTGAAGCAGATAAGTGCCTTGTCGATGGTGCTGATGAATATCTGCAGCTTCTTGATGTATGTACATCTACGAAGTGCTTATCCACCAGTGTTCGAGGTGTTCCTACAGTTTAG 489 0.4131 MSSRILYICKEEGLNLDSEALSTLGSISQGDLRRAITYLQSAARLFGSSISLKDLISVSRVIPTEVVQAFLATCKSGNFDSANKEVNDFIAEGYPVSQFLTQLFEAIVEADDISDEQKARISKKLGEADKCLVDGADEYLQLLDVCTSTKCLSTSVRGVPTV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02125 162 SUPERFAMILY post-AAA+ oligomerization domain-like 62 147 IPR008921 GO:0003677|GO:0006260
Accr4g02125 162 FunFam Replication factor C subunit 4 1 61 - -
Accr4g02125 162 Gene3D - 1 65 - -
Accr4g02125 162 Pfam Replication factor C C-terminal domain 63 146 IPR013748 -
Accr4g02125 162 CDD HLD_clamp_RFC 1 55 - -
Accr4g02125 162 FunFam Replication factor C subunit 4 62 151 - -
Accr4g02125 162 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 2 143 - -
Accr4g02125 162 Gene3D - 66 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02125 Accr-Chr4 29481436 29483475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02125 1 151 Core DNA Replication Machinery Family AT1G21690 68.421 5.44e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02125 K10755 - jre:109008893 243.047