Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02110 ATGAGAATTTATATCGTGGTGGTTAGCCCAATAGCTGCTGTTGTAGTTCTTGTTCTTCTGGTCTTGGGCATCATGAGGTGGAAGGGCTGGCTAGGAGCCAATGACTCTGTGTATAAAGATCTTAGACGTTTAGATCAGCAGATGGGATTATTTACATTGAGACAAATCAAAGCAGCAACTGAAAACTTCAATGCAGCCAACAAAATTGGGGAAGGCGGTTTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGGCACAGCAATTGCAGTAAAGCAGCTCTCCTCAAAATCTACTCGAATCAGTGGATTTGTGAATGAATTAGGAATGACATCTTGCCTTCAACATCCCAATATTGTTAAGCTTTATGGATGCTGTGTGGAAGGAGACCAGTTAATGTTGATATATGAGTATATGGAAAACAATTGTCTATCTCGTGTTCTTTTTGAGAAAAATCCTGCCTGCCAAGTGATATTGGACTGGGCAACCAGGAGGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTCCACGAAGATTGCGTGATTAAAATCATACACAGGGATATAAAAACAAGTAAAGTGTTGCTTGACGAGGATTTTAATGCTAAAATTTCAGACTTCGGTTTTGCAAGACTCAATGTAGATGAAAATACCCATATTAGCACTCGCGTTGTAGGAACACTTGGTTATGTAGCTCCTGAGTATGCAATGCATGGTTATCTAACTGATAAAGCTGACATTTATAGCTTCGGGGTAGTTGCATTGGAAATTGTCAGTGGAAGGAGTAATACAAGTTTCAGACCCAGCGAGGAATTCATTTCCCTCCTTGATTGGGCCAATGTTTTGCAAGAGAAAGGAAGGCTAATAGAGCTGGTGGATCCAGATTTGGGATCAGAATACTCAAGTGAGGAGGCCATGGTAATACTAAACATGGCACTCTTGTGTACCAATGCATCTCCTACACTTAGGCCAACAATGTCTCAAGTTCTGAGCATGCTTGAAGATAGAAGTAACACGCAGGAACTACTTCCCAATGATCCATGGCATGATGAAGCCGTTAATTTCAAAGATGAGGCCTTAAGAAGTCACTTCTGTGAGAATCTAAGTCTACAAGAAAGCATGTCAACTCATGGTCAGTGTCCTGGTTCCTCTAGTTCAGCCTTTGAAGTAGAAGAGAAGCACCTTCTTGTGAATGTTAGTTCAGACTCAACTACTAAAGCAAACTAG 1230 0.4122 MRIYIVVVSPIAAVVVLVLLVLGIMRWKGWLGANDSVYKDLRRLDQQMGLFTLRQIKAATENFNAANKIGEGGFGSVYKGLLPDGTAIAVKQLSSKSTRISGFVNELGMTSCLQHPNIVKLYGCCVEGDQLMLIYEYMENNCLSRVLFEKNPACQVILDWATRRKICLGIARALAYLHEDCVIKIIHRDIKTSKVLLDEDFNAKISDFGFARLNVDENTHISTRVVGTLGYVAPEYAMHGYLTDKADIYSFGVVALEIVSGRSNTSFRPSEEFISLLDWANVLQEKGRLIELVDPDLGSEYSSEEAMVILNMALLCTNASPTLRPTMSQVLSMLEDRSNTQELLPNDPWHDEAVNFKDEALRSHFCENLSLQESMSTHGQCPGSSSSAFEVEEKHLLVNVSSDSTTKAN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02110 409 CDD STKc_IRAK 69 335 - -
Accr4g02110 409 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 374 - -
Accr4g02110 409 FunFam Putative LRR receptor-like serine/threonine-protein kinase 138 345 - -
Accr4g02110 409 Gene3D Transferase(Phosphotransferase) domain 1 138 354 - -
Accr4g02110 409 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02110 409 Pfam Protein kinase domain 65 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02110 409 SUPERFAMILY Protein kinase-like (PK-like) 47 335 IPR011009 -
Accr4g02110 409 Gene3D Phosphorylase Kinase; domain 1 32 137 - -
Accr4g02110 409 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Accr4g02110 409 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 32 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02110 Accr-Chr4 28872271 28875461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02110 3 399 Receptor kinase-like Gene Family AT1G07650 62.657 3.98e-170 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr4g02110 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02110 - - vun:114195543 528.48