Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02087 ATGGCTTCTTCACATTCAATTATAAGGAATTTACCTGGCTTTTCTGGTGACCTCCCTTTCAAGCTTGAATCTGGATACATAGGAGTGGGACAAGAAGAGGAAGTGCAATTATTTTACTTATTTGTGGAATCTCAAAGAAATCCCTCAAAAGATCCAATCTTACTTTGGTTTGTTGGAGGCCCTGGTTGCTCTGCCCTTTCTGCATTTCTTTTTGAAAATGGGCCAGTAACAATTGACCGCAATTCCAGTGGGATTCTTCCAACACTTGTATTAAACCCTTATGCTTGGACACAGGTACTCAATGTCATGTACATAGATTTACCAGTTGGCACAGGATTTTCTTACTCACAAACACAACAAGGCTACTATAGCAATGATACTCTATGGATAGAAAATACATATGATTTTCTACAGAAGTGGTTTATTGATCATCCTGAGTTTGTCTCAAATCCATTTTATATTGGTGGCGGTTCATATTCAGCTTTGCCTACTGTTCCTCTTGTTAAAAAAGTATATGAAGGTAACAAAGCAGGAAGCAGTCCACTCATCAATATCAAAGGTTTTGTACTTGCCAGCCCATTTACCGATGCATTTCTGGATATGAACTCACGAGTTGCTTATGCACACCAGATGAGTCTTATATCAGATGAGCTCTATGAGTCAATCAAGGCAAGTTGTAATGGTGATTATGTCAACAGGATTCCAAACAACACAAAGTGTGTCTCAGATTATGAAGCCTACTCTCGTCTGATTCGTTATATAAACATAAATCAAATTTTGGAACCTGTTTGCATTAATACTCCCGATCTCAAAGACAGAATTCTCTTGGAAGATTCATCATCAGAAGGGATCCTCCAGTCTTTGCTGAAAGTTTCAAATTTCTGGTGTCGTGGGTATGACCACATACGTGTTAACCAATGGGCAAATAATGAGGATGTTAGGAATGCTCTTCATATTAGAGAGGGAACTAAAGGAGAGTTCTTGAGATGCAACAAGAGTTTATCGTACGAAACGAATCTGCAAAGTGTTGTTGATTATCATCGCGATCTCACTAAGACAAACCTTCAATGTCTTGTATACTGTGCTGATCTTGACTTGGCGATCCCACATGTTGGTACACAAGCTTGGATTAAGTCACTGAACTTGAAAATAGACGATCCTTGGCGTGCATGGTTCGTTGATGGTCAAGTTGCAGGATACACACAAATCTACAAGAACCATGACTACTTCTTGACATACGTTGGTGTGAAAGGTGCTGGTCATGTAGCCCAGTCATATAAACCTAAAGAAGTTCTCCAAATGATAGAGAGATGGTTCTCATATGCTCTTATTTAA 1335 0.391 MASSHSIIRNLPGFSGDLPFKLESGYIGVGQEEEVQLFYLFVESQRNPSKDPILLWFVGGPGCSALSAFLFENGPVTIDRNSSGILPTLVLNPYAWTQVLNVMYIDLPVGTGFSYSQTQQGYYSNDTLWIENTYDFLQKWFIDHPEFVSNPFYIGGGSYSALPTVPLVKKVYEGNKAGSSPLINIKGFVLASPFTDAFLDMNSRVAYAHQMSLISDELYESIKASCNGDYVNRIPNNTKCVSDYEAYSRLIRYININQILEPVCINTPDLKDRILLEDSSSEGILQSLLKVSNFWCRGYDHIRVNQWANNEDVRNALHIREGTKGEFLRCNKSLSYETNLQSVVDYHRDLTKTNLQCLVYCADLDLAIPHVGTQAWIKSLNLKIDDPWRAWFVDGQVAGYTQIYKNHDYFLTYVGVKGAGHVAQSYKPKEVLQMIERWFSYALI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02087 444 Pfam Serine carboxypeptidase 12 440 IPR001563 GO:0004185|GO:0006508
Accr4g02087 444 Gene3D - 296 442 - -
Accr4g02087 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 428 IPR001563 GO:0004185|GO:0006508
Accr4g02087 444 FunFam Serine carboxypeptidase-like 19 1 269 - -
Accr4g02087 444 Gene3D alpha/beta hydrolase 2 275 IPR029058 -
Accr4g02087 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 165 IPR001563 GO:0004185|GO:0006508
Accr4g02087 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 92 104 IPR001563 GO:0004185|GO:0006508
Accr4g02087 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Accr4g02087 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 115 IPR001563 GO:0004185|GO:0006508
Accr4g02087 444 SUPERFAMILY alpha/beta-Hydrolases 8 440 IPR029058 -
Accr4g02087 444 FunFam Carboxypeptidase 295 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02087 Accr-Chr4 27225585 27234703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02087 307 440 Calmodulin-binding Proteins AT2G22960 43.284 4.45e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02087 K16296 - qsu:112035786 525.398