Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02086 ATGATTAACGCAATGGGTTGGAGATGGTGGTGTGTCATCCAAGTTTTGCTTCTGCTTGGTCCGTTCATGGCTTCTTCACATTCAATTATAAGGAATTTACCTGGCTTTTCTGGTGACCTCCCTTTCAAGCTTGAATCTGGATACATAGGAGTGGGACAAGAAGAGGAAGTGCAATTATTTTACTTATTTGTGGAATCTCAAAGAAATCCCTCAAAAGATCCAATCTTACTTTGGTTTGTTGGAGGCCCTGGTTGCTCTGCCCTTTCTGCATTTCTTTTTGAAAATGGGCCAGTAACAATTGACCGCAATTCCAGTGGGATTCTTCCAACACTTGTATTAAACCCTTATGCTTGGACACAGGTACTCAATGTCATGTACATAGATTTACCAGTTGGCACAGGATTTTCTTACTCACAAACACAACAAGGCTACTATAGCAATGATACTCTATGGATAGAAAATACATATGATTTTCTACAGAAGTGGTTTATTGATCATCCTGAGTTTGTCTCAAATCCATTTTATATTGGTGGCGGTTCATATTCAGCTTTGCCTACTGTTCCTCTTGTTAAAAAAGTATATGAAGGTAACAAAGCAGGAAGCAGTCCACTCATCAATATCAAAGGTTTTGTACTTGCCAGCCCATTTACCGATGCATTTCTGGATATGAACTCACGAGTTGCTTATGCACACCAGATGAGTCTTATATCAGATGAGCTCTATGAGTCAATCAAGGCAAGTTGTAATGGTGATTATGTCAACAGGATTCCAAACAACACAAAGTGTGTCTCAGATTATGAAGCCTACTCTCGTCTGATTCGTTATATAAACATAAATCAAATTTTGGAACCTGTTTGCATTAATACTCCCGATCTCAAAGACAGAATTCTCTTGGAAGATTCATCATCAGAAGGGATCCTCCAGTCTTTGCTGAAAGTTTCAAATTTCTGGTGTCGTGGGTATGACCACATACGTGTTAACCAATGGGCAAATAATGAGGATGTTAGGAATGCTCTTCATATTAGAGAGGGAACTAAAGGAGAGTTCTTGAGATGCAACAAGAGTTTATCGTACGAAACGAATCTGCAAAGTGTTGTTGATTATCATCGCGATCTCACTAAGACAAACCTTCAATGTCTTGTATACTGTGCTGATCTTGACTTGGCGATCCCACATGTTGGTACACAAGCTTGGATTAAGTCACTGAACTTGAAAATAGACGATCCTTGGCGTGCATGGTTCGTTGATGGTCAAGTTGCAGGATACACACAAATCTACAAGAACCATGACTACTTCTTGACATACGTTGGTGTGAAAGGTGCTGGTCATGTAGCCCAGTCATATAAACCTAAAGAAGTTCTCCAAATGATAGAGAGATGGTTCTCATATGCTCTTATTTAA 1401 0.3947 MINAMGWRWWCVIQVLLLLGPFMASSHSIIRNLPGFSGDLPFKLESGYIGVGQEEEVQLFYLFVESQRNPSKDPILLWFVGGPGCSALSAFLFENGPVTIDRNSSGILPTLVLNPYAWTQVLNVMYIDLPVGTGFSYSQTQQGYYSNDTLWIENTYDFLQKWFIDHPEFVSNPFYIGGGSYSALPTVPLVKKVYEGNKAGSSPLINIKGFVLASPFTDAFLDMNSRVAYAHQMSLISDELYESIKASCNGDYVNRIPNNTKCVSDYEAYSRLIRYININQILEPVCINTPDLKDRILLEDSSSEGILQSLLKVSNFWCRGYDHIRVNQWANNEDVRNALHIREGTKGEFLRCNKSLSYETNLQSVVDYHRDLTKTNLQCLVYCADLDLAIPHVGTQAWIKSLNLKIDDPWRAWFVDGQVAGYTQIYKNHDYFLTYVGVKGAGHVAQSYKPKEVLQMIERWFSYALI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02086 466 Pfam Serine carboxypeptidase 34 462 IPR001563 GO:0004185|GO:0006508
Accr4g02086 466 Gene3D alpha/beta hydrolase 23 297 IPR029058 -
Accr4g02086 466 FunFam Serine carboxypeptidase-like 19 23 291 - -
Accr4g02086 466 Gene3D - 318 464 - -
Accr4g02086 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Accr4g02086 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Accr4g02086 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Accr4g02086 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Accr4g02086 466 FunFam Carboxypeptidase 317 465 - -
Accr4g02086 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 450 IPR001563 GO:0004185|GO:0006508
Accr4g02086 466 SUPERFAMILY alpha/beta-Hydrolases 30 462 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02086 Accr-Chr4 27225519 27234703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02086 329 462 Calmodulin-binding Proteins AT2G22960 43.284 9.88e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02086 K16296 - qsu:112035786 531.561