Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02084 ATGATTCACGCAATGGGTTGGAGATGGTGGGGTGTCATCCTAGTCCTGCTGCTGCTTGCTCCGTTCATGGCTTCTTCACGTTCAATCATCAAGAATTTACCTGGCTTTTCCGGTGACCTCCCTTTCAAGCTTGAATCTGGATACATTGGAGTTGGAGAAGAGGAGGAAGTGCAATTATTTTATTTGTTTGTGGAATCTCAGAGAAACCCCTTGAAAGATCCAATCTTGCTTTGGTTCGTTGGTGGCCCTGGTTGCTCTGCGCTTTCTGCATTTTTCTTAGAAAATGGACCCGTAACAATTGACCGCAATTCCAGAGGGATTCTTCCTAAACTTTTGCTAAATCCTTATGCTTGGACGCAGGTGCTTAATGTCATATACATAGATTTACCGGTTGGCACAGGATTTTCTTATTCCCAAACACAACAAGGCTACCATAGCAGTGATATACTGTGGATAGAGAATGCATATGATTTTCTACAAAAGTGGTTTATTGATTATCCTGAGTTTGTATCAAATATACTTTACGTTGGTGGTGGTTCATATTCAGCTATGCCCACCGTTCCACTTGTTAAAAATGTATATGAAGGTTGCAAAGCCGGAAGCAAACCATTCATAAATTTCAAAGGTTTTGTGCTTGCCAGCCCAGTAACTGATACATTTCTGGATTCAAACTCCAAAGTTGAATATGCACACTGTCTGAGTCTTATATCAGATGAGCTCTATGAGTCAATTAAGGCAAGTTGTAATGGTAATTATGTCAACATAAACCCGTACAACAAAAAGTGTGTCATAGATTATGAAGCTTACTCTCAGCTGATTCAATACATCAATGAGCTACAAATTTTGGAACCTCTTTGCGATATTATTCCCAATGACAATAGAAGAATTCTCTTCGAAGATTCGTCAGATGGGATCGTCCAGAATGATTCCACATTCTGGTGTCCTCGTGGTTATGATGTCATGCTTGTTGAGCAATGGGCAAATAATCAGGACGTTAGGAAGGCTCTTCAGATTAGAGAGGGAACTAAAGGGGAGTTCTTGAGGTGCAACAGGAGTTTGTCGTACAAATATGATCTAAAAAGTGTTGTTGATTATCATCGCAATCTCACTGAAACAAACCTTCAATTTCTTGTATACAGTGCTGATCTGGACCTGGTGATACCTTATATTGGTACACAAGCTTGGATAAAGTCATTGAACTTGAAAATAAAGGATCCTTGGCGTGCATGGTTTGTTGATGGTCAAGTTGCAGGATACACACAAATCTACAAGAAGCATAACTACTTCTTGACATATGTTGCTGTGAAAGGTGCTGGTCATGTAGCTCACGAGTATAAACCTAAAGAAGTTTTCCAAATGATAGAGAGGTGGTTCTCATATGCTCCTATTTAA 1392 0.3987 MIHAMGWRWWGVILVLLLLAPFMASSRSIIKNLPGFSGDLPFKLESGYIGVGEEEEVQLFYLFVESQRNPLKDPILLWFVGGPGCSALSAFFLENGPVTIDRNSRGILPKLLLNPYAWTQVLNVIYIDLPVGTGFSYSQTQQGYHSSDILWIENAYDFLQKWFIDYPEFVSNILYVGGGSYSAMPTVPLVKNVYEGCKAGSKPFINFKGFVLASPVTDTFLDSNSKVEYAHCLSLISDELYESIKASCNGNYVNINPYNKKCVIDYEAYSQLIQYINELQILEPLCDIIPNDNRRILFEDSSDGIVQNDSTFWCPRGYDVMLVEQWANNQDVRKALQIREGTKGEFLRCNRSLSYKYDLKSVVDYHRNLTETNLQFLVYSADLDLVIPYIGTQAWIKSLNLKIKDPWRAWFVDGQVAGYTQIYKKHNYFLTYVAVKGAGHVAHEYKPKEVFQMIERWFSYAPI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02084 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Accr4g02084 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Accr4g02084 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Accr4g02084 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Accr4g02084 463 FunFam Carboxypeptidase 315 463 - -
Accr4g02084 463 FunFam Serine carboxypeptidase-like 19 23 292 - -
Accr4g02084 463 SUPERFAMILY alpha/beta-Hydrolases 30 459 IPR029058 -
Accr4g02084 463 Gene3D alpha/beta hydrolase 24 296 IPR029058 -
Accr4g02084 463 Gene3D - 316 462 - -
Accr4g02084 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 447 IPR001563 GO:0004185|GO:0006508
Accr4g02084 463 Pfam Serine carboxypeptidase 34 459 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02084 Accr-Chr4 27151093 27158201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02084 320 463 Calmodulin-binding Proteins AT2G22960 43.750 3.94e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02084 K16296 - qsu:112035786 515.768