Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02071 ATGTCTAAAAGTGATCAATCCTCCGCTAAGCTTGTAGCTTTAATTTGTGTTAATCTCTCCATATTCTTCTGTATTGTTGCTTCCTTTACGTTTTCTGCTTCTGCGGCCATTCAAGATGATGGCGAAACAAAAGCTCTGTTGAACTGGAAAGCCAGCCTTACCAAACAAAGCCAAGCTACCTTGTCTTCTTGGAACAATGGGACTGATCTCTGCAGAAACTGGACGGGCATTTCATGTGGTGACAAATCCATGTCTGTGACCAATATAAGTCTCTCAAATCTTGGCCTACAAGGTAGACTTGATAATCTCAACTTCGCTTCCTTTCCGAATCTGCTATCTTTGATCCTGAGTAGAAACCAATTTTATGGGAACATTCCCCATGAGATTGGTAACTTGTCCAGTATTTTGATGTTGAATTTGTTCAATAATACTATTAGTGGCCCAATTCCTAAAGAAATAGGGGCATTGAGCACTCTGAGTCATCTTGATCTTAGTGCATGTCATCTCACAGAGAGAATTCCCAGTGAAATTGGAAACCTGAGGAACCTGACGCATCTAGTGCTTGCTGCAAATTCTCTTTCTGGTCCCATTCCTCAAGAGATTGGAATGTTGAGTAATCTTTTACGCCTCATTCTGACACAAAACTCAATGTTATCTGGTACAATCCCATCATCAATTGGAAACCTGAATAAGTTACAACAACTTCATCTCAATCTTTGCAATCTCTCGGGTCCCGTACCGAATGAAATTGGAAAACTCCATTCTCTCATGCGTATTGATTTAGAAGGAAATAAACTTTATGGGCCAATCCCTCCCTCTATGGGAAACTTTACACTTCTCAAGGAGTTAGTCTTGTCAAATAACAGACTTTTTGGTCCAATTCCTCAGTCCATAGGTAACATGATCAATTTACAGAAAATGTATCTAGAATCTAACAATCTTTCAGGACCTATTCCTTCTACTATAGGTAACTTGACAAAGCTCAACATTCTACTATTGATGAGGAACAATCTCAGTGGTCGCCTTCCATTAGAAATGAATAACATGACAATTTGGTATAATTTACAACTGAGTTATAATAATTTTCATGGCCAGTTGCCACAACAGATTTGTCATAGTGGGAGGTTATTTAGGTTTGTTGCTCGAGGTAACCAGTTCGCTGGTCCTATTCCAACTAGTCTGAAGAATTGTTTTACTCTGGAAAGACTCGGGCTTCAAGACAACCAATTAGTTGATAATATAACAGATGCTTTTGGAGTATATCCTAATTTGAACTACATTGATCTAAGTGACAATCAGTTGTATGGCCACCTTTCATCCAATTGGGGGAAGTGTCAAAATCTTAGTCAATTGTTTATTCACAATAACAAGCTTTCTGGTGGTATCCCACCAGAACTGGGAAATGCAACTAAGCTTGTTGAACTTGACTTGTCCTCAAATCATTTGTCAGGACAAATTCCAACAGAACTAGAGAAGTTGATCATGTTGACAAAACTCTCTTTGAGTCACAATAACTTCTCAGGCGATGTCATTTCAAATATAAGATCACTTAGTCGTCTTGAAACTTTGGAGTTGGCAGCAAATAATTTTAATGGCTCAATCACAAGAGAGATTGGGGAACTAAAACTCTTAAAGTTTTTGAACATGAGCAAAAACAAATTTGATGAAAGCATTCTCCTTGAGTTTCGTCAACTCCGAGACCTTGAACGACTTGATCTTGGTGACAATTTGCTAAGTGGAACAATACCATCAGAGCTTGGAATGTTACCCAAATTGCAACTATTGAACCTCTCACATAATAATCTCACTGGCTCTATTCCTTCTAGTTTCAGGGGAACAGTGTCAGCTTTGACAATTGTTGACATATCATACAACCAACTAGAAGGCCCTATTCCAAACAAGCCAGCTTTTCAAACATTGGAGGGATTGAAGAATAATAAAGGCTTGTGTGGTATTGGTGATGTCATTGGTTTACATCCTTGTGCTACTTCTCAAATGAATCCAAATAATCATAAGAGCAAAATGCTGTTGAAGATATTCCTCCCTTTGGCCATACTAGTACTAGTAGTGGTCGGAACTTCTTGTATTTATTTCCAATGCGCAAGAAATACAAAAAACAAAGATGAAGAAGCACAATTAGAAGATATTTATTTTGTATGGAGCTCCAATAGAGAAATATTGTATGAACATATAATTGATGCCACAGAGGATTTTGATGACAAGTATCTCACCGGGAAAGGAGGCCAAGGAAGTGTTTATAGGGCAGAGTTGCCTACAGGTGACATTGTTGCAGTAAAAAAGCTTCATTCATTACCAAGTGGAGAAATCTACAACCAAAAAGCTTTCACAAGTGAGATTCGAGCTTTGACAGAAATCAAACATCGCAACATTGTGAAGTTGTATGGTTTTTGTTCCAATGCACGATACTCCTTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGATAACATTCTAAAGGATGAGGACCAAGCTGCTATGCTTGATTGGAAGAAGAGGGTGAATGTTGTTAAAGGTGTGGCTAATGCATTATTCCATATGCATCATGGTTGTTCGACTCCTATTGTTCATCGTGACATATCGAGCAAGAATGTACTTGTAACTTCAGAATATGAAGAAGCTCGCATCATTGACTTTGGAACAGCGAAGTTTTTGAATCCTAACTCAAACAATATGACCACATTTGTTGGCACATTTGGGTATGCTGCTCCAGAGATTGCTTACATTATGGAAGTGAACCCGAAATGTGATGTCTACAGCTTTGGAGTGTTGACTTTGGAAATCATAATGGGCATACATCCAGGAGAGTTTATTTTATCTTTGATAGATGAATCAACCACCACCTATGATTTGTTGTTAAAGGATGTATTGGACTCCCGACTTCCACCACCTAGAAAATCAACCCTTGATGAGGTTATCACAATTGCGAAAATAGCATTTTCTTGTTTGAATGACGATCCTCAATCTCGTCCAACCATGGAACAAGTATCCAAGGAGCTTTCATGGAGACCGAAACCTCATATGGAAGGTCATTTTGTTACCATCACAATTGGACAACTAATAAATTATTAA 3093 0.3841 MSKSDQSSAKLVALICVNLSIFFCIVASFTFSASAAIQDDGETKALLNWKASLTKQSQATLSSWNNGTDLCRNWTGISCGDKSMSVTNISLSNLGLQGRLDNLNFASFPNLLSLILSRNQFYGNIPHEIGNLSSILMLNLFNNTISGPIPKEIGALSTLSHLDLSACHLTERIPSEIGNLRNLTHLVLAANSLSGPIPQEIGMLSNLLRLILTQNSMLSGTIPSSIGNLNKLQQLHLNLCNLSGPVPNEIGKLHSLMRIDLEGNKLYGPIPPSMGNFTLLKELVLSNNRLFGPIPQSIGNMINLQKMYLESNNLSGPIPSTIGNLTKLNILLLMRNNLSGRLPLEMNNMTIWYNLQLSYNNFHGQLPQQICHSGRLFRFVARGNQFAGPIPTSLKNCFTLERLGLQDNQLVDNITDAFGVYPNLNYIDLSDNQLYGHLSSNWGKCQNLSQLFIHNNKLSGGIPPELGNATKLVELDLSSNHLSGQIPTELEKLIMLTKLSLSHNNFSGDVISNIRSLSRLETLELAANNFNGSITREIGELKLLKFLNMSKNKFDESILLEFRQLRDLERLDLGDNLLSGTIPSELGMLPKLQLLNLSHNNLTGSIPSSFRGTVSALTIVDISYNQLEGPIPNKPAFQTLEGLKNNKGLCGIGDVIGLHPCATSQMNPNNHKSKMLLKIFLPLAILVLVVVGTSCIYFQCARNTKNKDEEAQLEDIYFVWSSNREILYEHIIDATEDFDDKYLTGKGGQGSVYRAELPTGDIVAVKKLHSLPSGEIYNQKAFTSEIRALTEIKHRNIVKLYGFCSNARYSFLVYEFLEGGSLDNILKDEDQAAMLDWKKRVNVVKGVANALFHMHHGCSTPIVHRDISSKNVLVTSEYEEARIIDFGTAKFLNPNSNNMTTFVGTFGYAAPEIAYIMEVNPKCDVYSFGVLTLEIIMGIHPGEFILSLIDESTTTYDLLLKDVLDSRLPPPRKSTLDEVITIAKIAFSCLNDDPQSRPTMEQVSKELSWRPKPHMEGHFVTITIGQLINY 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02071 1030 Gene3D Transferase(Phosphotransferase) domain 1 817 1016 - -
Accr4g02071 1030 SMART LRR_typ_2 156 180 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 517 541 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 470 493 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 589 612 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 108 132 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 565 588 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 253 277 IPR003591 -
Accr4g02071 1030 SMART LRR_typ_2 301 325 IPR003591 -
Accr4g02071 1030 FunFam Nuclear pore complex protein NUP107 39 199 - -
Accr4g02071 1030 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 349 665 - -
Accr4g02071 1030 PANTHER LEUCINE RICH REPEAT KINASE 2 298 1010 - -
Accr4g02071 1030 SUPERFAMILY RNI-like 307 630 - -
Accr4g02071 1030 ProSitePatterns Tyrosine protein kinases specific active-site signature. 862 874 IPR008266 GO:0004672|GO:0006468
Accr4g02071 1030 FunFam Leucine-rich repeat receptor protein kinase MSP1 701 816 - -
Accr4g02071 1030 Pfam Leucine Rich Repeat 591 611 IPR001611 GO:0005515
Accr4g02071 1030 Pfam Protein kinase domain 743 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02071 1030 SUPERFAMILY Protein kinase-like (PK-like) 716 1007 IPR011009 -
Accr4g02071 1030 FunFam Leucine-rich repeat receptor protein kinase EMS1 246 345 - -
Accr4g02071 1030 Gene3D Ribonuclease Inhibitor 353 654 IPR032675 -
Accr4g02071 1030 Gene3D Ribonuclease Inhibitor 217 352 IPR032675 -
Accr4g02071 1030 FunFam MDIS1-interacting receptor like kinase 2 817 1013 - -
Accr4g02071 1030 PRINTS Leucine-rich repeat signature 589 602 - -
Accr4g02071 1030 PRINTS Leucine-rich repeat signature 472 485 - -
Accr4g02071 1030 Gene3D Ribonuclease Inhibitor 39 216 IPR032675 -
Accr4g02071 1030 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Accr4g02071 1030 ProSiteProfiles Protein kinase domain profile. 738 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02071 1030 Gene3D Phosphorylase Kinase; domain 1 698 816 - -
Accr4g02071 1030 SUPERFAMILY L domain-like 42 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02071 Accr-Chr4 26565279 26568454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02071 21 911 Receptor kinase-like Gene Family AT4G08850 42.196 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02071 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02071 - - pcin:129318235 1225.31