Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02065 ATGTCTAGAGATAAATCCTTGAAGATGGAAATTCCAAAACAAAAGAAGAGAGAATTTTCTTACTCACAAGTTCTTCATATCACCAACAATTTCAAAACTCTTATTGGAGAAGGAGGATTCGGCAAAGTTTACCTTGGTGCTTTGGAAGATAACTCTCAAGTTGCAGTAAAATTACTTTCTCCATCTTCAAAGCAAGGATACAAGGAATTTCAATCAGAGGCTCAACTCTTGACAGTTATTCATCACAGAAACTTGGTTTCACTTATTGGGTATTGCCTTGAAAACAACATGATGGCTTTGATTTATGAATATGTGGATAATGGGGACCTTGCCCAACTATTATCAGAGAAAAACTCAAATGTTTTGAAGTGGAATGAGAGACTTCAAATTGCAATTGATGCAGCCAAAGGATTGGAATATCTTCATAGTGGTTGCAGTACTCCAATAATCCATCGAGACTTGAAGCCATCCAACATTCTATTAAATAAATCTATGATAGCCAAGCTTGCTGACTTTGGACTCGCTAGAGCATTTACCGACGAAAGAGATACTCATCTATCTACTCAACCAGCTGGTACTCCTGGTTATATTGATCCTGTATTTCAGCGATCTGGAAAACTAAATAAGAAAAGTGATGTTTATAGTTTTGGAATGATTCTTCTTCAGCTAATAACAGGTCGTCCTCCGGTAAGGAGAGGACCTGAGGATATGAGTTTCATTCTTGATTGGATTCAACCCAAAATTGAAAGTGGGGATATTGAAGCCATTGTTGATCCAAGATTAGCTTCAGAAGAATTTCATGTTACTTCAACATGGAAAGCTGTTGAAGTAGCAATGTCTTGTGTGCTACCAACACCATCCCAGAGACCAAACATAAGTTACATATTGCAAGAACTACAAGAATGTCTAGCTTTGGAGATGGATCAACATGCGAGAATAATAGATAATAACAACATTGGGACAATCAATTATTCACGTGATTATACTGGGAACAGTGAACCAATCACTATTCTCTCTGCTAGGTGTAATATCCCGAATTTTGGGCCTATAGACTTGAAATTAGTCTATTTTTGGAAGACTACTAGGCCATATTTTTGA 1098 0.3698 MSRDKSLKMEIPKQKKREFSYSQVLHITNNFKTLIGEGGFGKVYLGALEDNSQVAVKLLSPSSKQGYKEFQSEAQLLTVIHHRNLVSLIGYCLENNMMALIYEYVDNGDLAQLLSEKNSNVLKWNERLQIAIDAAKGLEYLHSGCSTPIIHRDLKPSNILLNKSMIAKLADFGLARAFTDERDTHLSTQPAGTPGYIDPVFQRSGKLNKKSDVYSFGMILLQLITGRPPVRRGPEDMSFILDWIQPKIESGDIEAIVDPRLASEEFHVTSTWKAVEVAMSCVLPTPSQRPNISYILQELQECLALEMDQHARIIDNNNIGTINYSRDYTGNSEPITILSARCNIPNFGPIDLKLVYFWKTTRPYF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02065 365 SUPERFAMILY Protein kinase-like (PK-like) 10 299 IPR011009 -
Accr4g02065 365 FunFam Leucine-rich repeat receptor-like protein kinase 7 104 - -
Accr4g02065 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Accr4g02065 365 Pfam Protein tyrosine and serine/threonine kinase 31 299 IPR001245 GO:0004672|GO:0006468
Accr4g02065 365 PANTHER OS07G0107800 PROTEIN-RELATED 14 307 - -
Accr4g02065 365 Gene3D Transferase(Phosphotransferase) domain 1 105 324 - -
Accr4g02065 365 CDD STKc_IRAK 35 301 - -
Accr4g02065 365 Gene3D Phosphorylase Kinase; domain 1 11 104 - -
Accr4g02065 365 ProSiteProfiles Protein kinase domain profile. 29 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02065 365 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 105 312 - -
Accr4g02065 365 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524
Accr4g02065 365 SMART serkin_6 29 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02065 Accr-Chr4 26501324 26503918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02065 15 309 Receptor kinase-like Gene Family AT1G51890 51.689 1.23e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Accr4g02065 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02065 - - pcin:129289942 447.973