Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02038 ATGGAAGAATCAGGCAAATTACAATCTGAAGAGAATAAAGGCTCTATGGAGACAAATAAGAAGAGAAAACTCAAAACACCTGCTCAGATTTATGCTTTGGAGAAATTTTATGATGAGCACAAATATCCCACTGAAGAAATGAAATCAGAACTTGCTGAGGAGTTGGGGTTGACTGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAGAGACTGTTGAAAGATGAAGCTTGTGCTAATGGGCGGCAAGATATTTCAAGTGGTGTCGTCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATGGTGATTATAAGCATCTTGATCCCAAAGAGGTTGAGAGTCGTGGCCTTTATGGTGGTCATGATCTTTTAGTTTCAGATATGGCCTTTGAACGTAGGAATCATTATTCTGAAAATGTTTGTGCAATGGATGACACATCATCTGAGAGCAGCTCATATTTGCAAGATAAGGATTCATATGACGCTGAGCCTTCTGGTTATCCAATACCTAATGGAGCTCTTCCGAGTAAAATTCCTAAGGCTACTACAAACATGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATTGAAAACCCTGTTATAACTGCTGTTAAGAAGCAATTAGGAAGAAATTATTGTGAAGATGGTCCGCTACTTGGTATAGAATTTGATCCACTTCCTCCTGGGGCATTCGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCAAGTCGTGCTGTTAAATGTTCTCCTGAAATTTCTGCTTTGAAAAGGCAACCCGGTCTTTCTGATATATATGATTTGTATAATGCCAAATGCAATTCCCAAGATTCACATATGGAAGGAGAAGACCTTGCTGATTTCCAGGATAAGAAACCTCAACAGCATTCAAAGCAAAGACCACCTTTGTACGGTCATGCCTCTCGATTGCCTAGCAGAAACTCAACCCTGGATTTGTACGACCATTCTGTTAGAGAAGCACCTTCGTATAATAGCAGAGAGAATTGTAGAGTTGGCATCAAGCATGGCTTTGAAGGCTTAAAATCTGATTCTGCTTCTAATCGTAGTGATCACTATGATGGTAACCTTGCAGCAAATCCAAAAGACGCACTGTTGCATGGATATGATTATGTTAATTTGAAGAATGTTCAGAGTGAATATGTAAACCTTGTGCCTTCAAAGCCAATGAGGAACCCTTTTGTTTCTATGGATACGAAGGATAGAGGAGGCCTATCCGGTAGGATGATAAAGGAAAAGATGTCTAGTGAGAAAAGAATGGCTAGAAAGCAATGTGATGATCCAGACACACTAAGGATGCTTTTGCTTAAGGCTGCAAACCGTGTCGATCCACCTCTTCAATACAATGCTAAAGAAGATCATATTGCTGAGATGCAACCACATAAAATCCTGAGATCGTCCATGGAAGTGTCATCTAGCTTTAGTGAGGATGAAACCGTGAATCCCAGCTCGTCTCTCGATGAAGCAATCGGTTGTCATTAA 1548 0.3992 MEESGKLQSEENKGSMETNKKRKLKTPAQIYALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDISSGVVQDHGSGLGQDSCGSTKHGDYKHLDPKEVESRGLYGGHDLLVSDMAFERRNHYSENVCAMDDTSSESSSYLQDKDSYDAEPSGYPIPNGALPSKIPKATTNMRYKPSGYLKVKGEIENPVITAVKKQLGRNYCEDGPLLGIEFDPLPPGAFECKIADPFHETYYMASRAVKCSPEISALKRQPGLSDIYDLYNAKCNSQDSHMEGEDLADFQDKKPQQHSKQRPPLYGHASRLPSRNSTLDLYDHSVREAPSYNSRENCRVGIKHGFEGLKSDSASNRSDHYDGNLAANPKDALLHGYDYVNLKNVQSEYVNLVPSKPMRNPFVSMDTKDRGGLSGRMIKEKMSSEKRMARKQCDDPDTLRMLLLKAANRVDPPLQYNAKEDHIAEMQPHKILRSSMEVSSSFSEDETVNPSSSLDEAIGCH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02038 515 SUPERFAMILY Homeodomain-like 19 85 IPR009057 -
Accr4g02038 515 MobiDBLite consensus disorder prediction 157 185 - -
Accr4g02038 515 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Accr4g02038 515 MobiDBLite consensus disorder prediction 488 508 - -
Accr4g02038 515 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Accr4g02038 515 MobiDBLite consensus disorder prediction 488 515 - -
Accr4g02038 515 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 509 - -
Accr4g02038 515 MobiDBLite consensus disorder prediction 305 327 - -
Accr4g02038 515 SMART HOX_1 18 80 IPR001356 GO:0003677
Accr4g02038 515 CDD homeodomain 20 75 IPR001356 GO:0003677
Accr4g02038 515 Gene3D - 9 91 - -
Accr4g02038 515 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02038 Accr-Chr4 25840694 25844948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02038 3 509 Homeobox Transcription Factor Family AT4G03250 38.131 1.59e-80 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr4g02038 Homeodomain 7.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02038 - - gmx:100803515 593.193