Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02029 ATGTCTGGAAGAGATTATCCCACTAAGCTGCTGCTAGCATTATTCTTGTGTGTTGCTTCCTTTATTGCATCTGTTGCTGCACGAGATAGAGAAGCAAAAGCTCTTTCGATCTGGAGAGCTAGCTTTAACGACGAAAGCAAAGCTACCTTGTCTTCTTGGAAAAATGGCACTGATCCTTGCAGACAGTTCTGGAAGGGAATTTCATGTGACAAATCAATGTCTGTGACCAATATAAGTCTCTCAGATCTTGACCTTCAAGGTACACTATCCAGTCTCAACTTCTCTGCCTTTCCTAATCTCCTCTACTTCGACATACATCAAAACCAATTTCATGGATTCATTCCCCATGAAATTGGTAAGTTGTCAGAAATTTTGATGTTGAATTTGTCAAGTAATCAAATTAGGGGTCCTATTCCTCCTGAAATCTGGAATCTCACCACTCTAAATCATCTTGATCTTAGTACGTGTAATCTCACAGGACAAATTCCCCGTGAAATTGGGAATTTGAGGAATTTGAGTCTCCTATGGCTTCAAGAAAATTCTGGGCTTTATGGTCCCATTCCTCAAGAGATTGGAATGTTGAGCAATCTTGTAGAGCTTCGTCTGAATATCATGTCTCTGTCAGGGAGAATTCCATCATCAGTTAGAAACTTGACCATGTTAAGAATACTTGATCTTCATAAGAACAATCTCGAGGGTCCTATTCCAACTGAATTATGGCAACTCTCTTCTCTCATGAGTCTCCAGTTAAATGAAAATAGACTTTCTGGGCCAATCTCTCCTTCCATAGGAAACCTGTCAAATCTGTATGAAATCGAGTTTTCTGATAACAGATTTTCTGGTCCAATTCCTCAATCCATTGGTAACTTGATCGGGTTAATAACTTTCATTATAGATGGTAACAACCTTGCAGGACCTATTCCTTCGACTATAGGAAACTTGACAAAGCTCAAAATTCTAGTATTAAACTCGAACAGTCTCAGTGGTCAACTTCCACAAGAAATGAGTAACATGACAAATTGGTATAATTTACAACTGAGTGATAATCATTTCCATGGCCATTTACCACACCAGATTTGTCAAAGTGGGTGGTTAAAAAGGTTTACAGCCAGAAATAACCAGTTCAGTGGTCCTATTCCAACTAGTTTGAAGAATTGTCCTAGTCTAGAGAGACTCGTGCTTAATGATAACCAATTAGTTGATAATATAACAGAGGCTTTTGGAGTATATCCTCGTTTGAACTTTCTCAATATAAGTGGCAATCATCTTTATGGCCACCTTTCGCCTAGCTGGGGGAAGTGTAAAAATCTCACACAATTGAGTATTCAGAATAACAATCTTTCTGGTGACATGCCACCAGATCTAGGAGAGGCAACTATGCTTGGTTTACTTGAATTGTCTTCAAATCATTTGTATGGACAAATTCCAAAAGAACTAGAGAAGTTGACCATGTTGTCAAAACTCTCTTTGGGTGACAATAATTTCTCTGGTAAAGTCCCCTCAAATATAAGGTCACTTAGTCAGCTTCAAACATTAGAGTTGGCGGCAAATAATTTTAAAGGTTCAATCACAAGAGAGATTGGGGAACTAAAAAGCTTGAAGTTCTTGAACTTGAGCAAAAACAAATTTGACAAAAGCATCCCCCTTGAGTTTGGTGAACTCCAAGACCTTGAACAACTTGATCTTAGTGATAATTCACTAATTGGAACAATACCATCAAGTGTTGGAAGGTTACCCAAATTGCAAGTATTGAACCTCGCACATAATAATCTCACCGGCACCATTCCTTCCGGTTTCAATGAATCAATGTCAGCTTTGTCTACCATTGACATATCATACAATCAATTAGAAGGTCCCATTCCAAACAAACCACCCTTTCGCAATTTTGGTGTATTGAGGAATAATAAAGGTTTGTGCGGTAATGTCACTGGCTTAAGTCCTTGTAGTGCTTTACAGAGAAATGGACGTGGTCATAAGAGTAAAAAGTTATTATTAATAATCTTCCCATTAGCCATACTTGTTCTAGTACTTGCTGGAGCATCTTTCTTTTTTTCTCGAGTCGTAAGAAAAGCAAAACACAAAGATGGAGAAGCTCCCACAGAAGAAGTTTATTTTGTATGGAGTCTTGGAAGAGAAATATTGTATGAAGATATCATTGAAGCCACAAAGGAATTTGACGAAAGGTATCTCATCGGGAAAGGGAGCCAAGGAAGTGTTTATAGGGCTGAATTGCCCACAGGTGACGTTGTTGCTGTAAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACCAGAAAGCTTTTACAAGTGAGATTCAAGCTTTGACAGAAATCAAACATCGTAACATTGTAAAGTTGTATGGGTTTCATTCCAACTCACAATTCTCCTTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGATAACATACTAAAGAATCAGAGACAAGCCACTGAGTTTGACTGGAATAAGAGGGTGAGTGTTGTTAAAGGTGTGGCTAATGCTTTATTCTATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTAATTACGAAGAAGCGCACATCATTGACTTTGGAACGGCAAAGTTTTTGAATCATAACTCAAACAATATGACTACATTTGCTGGCACATTTGGGTATGCTGCGCCAGAGATTGCTTTCATTATGAAAGCGAATGAGAAATGTGATGTTTATAGCTTTGGAGTATTGTCTTTAGAAATTATTATGGGAAAACATCCAGCAGAGCTTATTATATCTTTGGCAGAGAGTTCCACCAATAAGTACTTATTAGAGGATGTGTTGGACCAACGACTTTCTCCACTCACAAAACCAATCCTAGATGATGTGATCTTAGTTTCAAAAATAGCTTTTTCTTGCTTGAATGAGGCTCCTCAATCTCGTCCGACAATGGAACAAGTATCCACAGAATTTGCAAGGACTCCAAAATCTTATTCTGAGGATCAATTTCACACCATCAGAATTGGTCAACTAATGAGGGATTGA 3048 0.3829 MSGRDYPTKLLLALFLCVASFIASVAARDREAKALSIWRASFNDESKATLSSWKNGTDPCRQFWKGISCDKSMSVTNISLSDLDLQGTLSSLNFSAFPNLLYFDIHQNQFHGFIPHEIGKLSEILMLNLSSNQIRGPIPPEIWNLTTLNHLDLSTCNLTGQIPREIGNLRNLSLLWLQENSGLYGPIPQEIGMLSNLVELRLNIMSLSGRIPSSVRNLTMLRILDLHKNNLEGPIPTELWQLSSLMSLQLNENRLSGPISPSIGNLSNLYEIEFSDNRFSGPIPQSIGNLIGLITFIIDGNNLAGPIPSTIGNLTKLKILVLNSNSLSGQLPQEMSNMTNWYNLQLSDNHFHGHLPHQICQSGWLKRFTARNNQFSGPIPTSLKNCPSLERLVLNDNQLVDNITEAFGVYPRLNFLNISGNHLYGHLSPSWGKCKNLTQLSIQNNNLSGDMPPDLGEATMLGLLELSSNHLYGQIPKELEKLTMLSKLSLGDNNFSGKVPSNIRSLSQLQTLELAANNFKGSITREIGELKSLKFLNLSKNKFDKSIPLEFGELQDLEQLDLSDNSLIGTIPSSVGRLPKLQVLNLAHNNLTGTIPSGFNESMSALSTIDISYNQLEGPIPNKPPFRNFGVLRNNKGLCGNVTGLSPCSALQRNGRGHKSKKLLLIIFPLAILVLVLAGASFFFSRVVRKAKHKDGEAPTEEVYFVWSLGREILYEDIIEATKEFDERYLIGKGSQGSVYRAELPTGDVVAVKKLHSMPSGEISNQKAFTSEIQALTEIKHRNIVKLYGFHSNSQFSFLVYEFLEGGSLDNILKNQRQATEFDWNKRVSVVKGVANALFYMHHGCSIPIVHRDISSKNVLLSSNYEEAHIIDFGTAKFLNHNSNNMTTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLSLEIIMGKHPAELIISLAESSTNKYLLEDVLDQRLSPLTKPILDDVILVSKIAFSCLNEAPQSRPTMEQVSTEFARTPKSYSEDQFHTIRIGQLMRD 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02029 1015 PANTHER LEUCINE RICH REPEAT KINASE 2 287 995 - -
Accr4g02029 1015 Gene3D Phosphorylase Kinase; domain 1 686 803 - -
Accr4g02029 1015 FunFam Leucine-rich repeat receptor-like kinase 31 140 - -
Accr4g02029 1015 FunFam MDIS1-interacting receptor like kinase 2 804 998 - -
Accr4g02029 1015 Pfam Protein kinase domain 729 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02029 1015 SUPERFAMILY RNI-like 299 618 - -
Accr4g02029 1015 Gene3D Ribonuclease Inhibitor 325 650 IPR032675 -
Accr4g02029 1015 ProSiteProfiles Protein kinase domain profile. 725 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02029 1015 FunFam Leucine-rich receptor-like protein kinase family protein 141 236 - -
Accr4g02029 1015 SMART LRR_typ_2 482 506 IPR003591 -
Accr4g02029 1015 SMART LRR_typ_2 121 145 IPR003591 -
Accr4g02029 1015 SMART LRR_typ_2 314 338 IPR003591 -
Accr4g02029 1015 SMART LRR_typ_2 578 602 IPR003591 -
Accr4g02029 1015 SMART LRR_typ_2 530 554 IPR003591 -
Accr4g02029 1015 SMART LRR_typ_2 218 242 IPR003591 -
Accr4g02029 1015 SUPERFAMILY L domain-like 50 303 - -
Accr4g02029 1015 SUPERFAMILY Protein kinase-like (PK-like) 703 989 IPR011009 -
Accr4g02029 1015 Gene3D Transferase(Phosphotransferase) domain 1 804 1009 - -
Accr4g02029 1015 FunFam Leucine-rich receptor-like protein kinase family protein 237 333 - -
Accr4g02029 1015 Pfam Leucine Rich Repeat 580 599 IPR001611 GO:0005515
Accr4g02029 1015 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Accr4g02029 1015 FunFam Leucine-rich repeat receptor protein kinase MSP1 688 803 - -
Accr4g02029 1015 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 338 652 - -
Accr4g02029 1015 ProSitePatterns Tyrosine protein kinases specific active-site signature. 849 861 IPR008266 GO:0004672|GO:0006468
Accr4g02029 1015 Gene3D Ribonuclease Inhibitor 242 315 IPR032675 -
Accr4g02029 1015 Gene3D Ribonuclease Inhibitor 184 241 IPR032675 -
Accr4g02029 1015 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02029 Accr-Chr4 25511714 25514852 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02029 1 902 Receptor kinase-like Gene Family AT4G08850 41.189 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02029 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02029 - - pcin:129295243 1126.69