Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02025 ATGTCTGAAAGTGAATACTTCACCAAGTTTCTAGCATTGAGGTTTATTAATGTCTCTACATTCTTCTTTATTGTTGCTTCCTTCACATTTTCTGCTGCTGCTTTTGAAGATGGCGAAGCAAAAGCTTTGTTGAACTGGAAAGCCAGGCTTACCAAAGAAAGTCAAGCTACTTTGTCTTCTTGGAACAATGGTACTAATCTCTGCAGAAACTGGAAGGGCATTTCATGTGACAAATCCATGTCTGTGACCAATATAAGTATCTCAAATCTTGGCTTACAAGGTAAACTTGACAGTCTCAACTTCGCTTCCTTTCCTAATCTCCAATATTTTGATCTTAGTTACAACCAGTTTCATGGAAACATTCCCCACGAGATTGGTAACTTGTCCAGTATTTTGATGTTGAGTTTGTCGGAGAATCCTTCAGTTAGTGGTCCCATTCCTAAACAAATAGGAAAATTGAGCACTTTAAGTGTTCTTGATCTTAGTGCGTGTGATCTCTCAGAGAAAATTCCTAGGGAAATTGGGAACTTGAGGAACCTGACGAAGCTAGTGCTTGCTGCAAATTCTCTTTCTAGTCCCATTCCTAAAGAGATTGGGATGTTGAGTAATCTCTTGCAACTTGATTTGTCAGAAAACTCAGTGTTATCTAGTGGAATTCCATCATCAATTGGAAACTTGAACAAGTTGCAAGATTTTTATCTCAATGATTGCAATCTCTCTGGTCCTTTACCCAATGAAATTGGAAAACTCAATTTTCTCAAACAGATTGATTTAAGCAACAACGAACTTGATGGGCCAATCCCTCCCTCTGTAGGAAACTTGACACTTCTCGAGAAGTTGGTCTTGTCAAATAACAGTCTTTCTGGTCCAATTCCTGAATCCATCGGTAATGCGATCAGTTTACAAGAGATCTATATAGAATATAACAATCTTTCAGGACCAATTCCTGCCACTATAGGAAACTTGAAAAACCTTGACACTTTAGTATTGATGCGGAACAATCTTAGTGGTCAACTTCCACAAGAAATAAATACCATAAATTGGTATAATTTACAATTGGGTGATAATCATTTCCATGGCCATTTGCCACAACAGATTTGTCAAAGTGGGAGGTTATTTAGGTTTGCTGTTGGAAATAACCAGTTCTCTGGCCCTATCCCAACTAGTTTGAAGAACTGTTCAAGTCTAGAAAGACTCGGACTTCAGGAAAACCAATTAGTTGATAATATTACAACTGCTTTTGGAGTATATCCTAATTTGGACTACATTGATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCTAGGTGGGGGAGGTGTCAAAATCTCACACGATTGATTATTCACAATAACAGGCTTTCAGGTGATATACCTCCAGAACTAGGAGGGGCAACCAAGCTTGGTTTACTTGACTTGTCTTCAAATAATTTGTCTGGACACATTCCAAAAGAACTAGGGAATTTGGTCATGTTGATAGAACTCTATTTGAGTGATAATAACTTCTCAGGTAAAGTCCCCTCAAATATAAGATCACTTAGTCGGCTTCAAACTTTAGAGTTGGCAGCAAACAATTTTAATGGCTCAATGACAAAAGAGATTGGGGAACTAAAAAGCTTAATGTTCTTGAACTTGAGCAAAAACAAATTTGAGGAAAGCATTCCCCTTGAGTTTGGTGAACTCCGAGAACTTGAAAAGCTTGATTTTAGTGACAATTTGCTAATTGGAACACTACCATCAATGCTTGGAATATTACCTAAATTGCAACTACTGAACCTCTCACATAATAATCTCACTGGCAGCATTCCTTCCAGTTTCGGCCGATCAATGTCAGCTTTGTCTACTGTTGACATATCATACAATCAATTAGAAGGCCCCATTCCAATCAAACCAGTCTTTTACAATTTTGATTCACTGAGGAGTAATAGAGGTTTGTGTGGCAACGTCACCGGTTTAAGTCCTTGTGGTGATTCAAAAGCAAATGGGCATGGCCATAGGAGCAAAAAGTTATTGATAATATTCCTCCCATTGACCATACTACTACTTGTAGTGGTTGGGGCTTTTTGTATTTTTCTCCTGCATGCAAGAAATACAGAAACCAAAGATGAAGAAGCACTATCACATGATATTTATTATGTATGGAGTTCCAATGAAAAAATATCCTTTGAAAATATCATCAAAGCCACAGAGGAGTTTGATGATAGATATCTCATCGGGAAAGGGGGCCAAGGAAGTGTTTATAAGGCAAAATTGCCTACAGGTGTAATTGTTGCTGTAAAGAAGCTTCATTCAATCTCAAATGGGGAAATCTATAGTCAGAAAGCTTTCACAAGTGAGATTCGAGCTTTGACCGAAATGAAACATCGCAACATTGTGAAGTTGAAAGGGTTTTGTTCCCATTCACGATACTCCTTTTTAATTTATGAGTACTTGGAAGGTGGCAGCTTGGACAACATACTCAAGGATGAAAATCAAGCCACTAAGCTTGATTGGCATAAGAGGGTGAATGTTGTTAAAGGTGTAGCTAATGCTTTATTCCATATGCATCATGGATGTTCACTTCCAATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAACTTCAAAATATGAAGAAGCTCGCATCATTGACTTTGGAACATCAAAGTTTTTGAATCCTGACTCAAACAACATGACTAAATTTGCTGGTACATTTGGGTATGCTGCTCCAGAGATTGCTTACAATATGGAAGCGAACGAGAAATGTGATGTTTACAGCTTTGGAGTGTTGACTATAGAGATCATTATGGGAATGCATCCAGGAGAGCTTGTTTATTCTTTGATAGAGGAATCAACCACCTTTAATTTGTTGTTAAAGGATGTGTTGGATCCACGACTTTCACTGCCTAAAAAACTAATCCTTGATGAGGTTGTCAGAATTGCAAAAATAGCATTTTCTTGTTTGGATAAGAACCCTCGATCTCGTCCAACCATGGAACAAGTATCTATAGAGCTGGAACGAGGACCAAAATCTCATGTGGAAGATCCATTTGACACCATCACAATTGGACAACTAATGGAGAATTATACTCCTTAA 3081 0.3794 MSESEYFTKFLALRFINVSTFFFIVASFTFSAAAFEDGEAKALLNWKARLTKESQATLSSWNNGTNLCRNWKGISCDKSMSVTNISISNLGLQGKLDSLNFASFPNLQYFDLSYNQFHGNIPHEIGNLSSILMLSLSENPSVSGPIPKQIGKLSTLSVLDLSACDLSEKIPREIGNLRNLTKLVLAANSLSSPIPKEIGMLSNLLQLDLSENSVLSSGIPSSIGNLNKLQDFYLNDCNLSGPLPNEIGKLNFLKQIDLSNNELDGPIPPSVGNLTLLEKLVLSNNSLSGPIPESIGNAISLQEIYIEYNNLSGPIPATIGNLKNLDTLVLMRNNLSGQLPQEINTINWYNLQLGDNHFHGHLPQQICQSGRLFRFAVGNNQFSGPIPTSLKNCSSLERLGLQENQLVDNITTAFGVYPNLDYIDLSGNQLYGHLSSRWGRCQNLTRLIIHNNRLSGDIPPELGGATKLGLLDLSSNNLSGHIPKELGNLVMLIELYLSDNNFSGKVPSNIRSLSRLQTLELAANNFNGSMTKEIGELKSLMFLNLSKNKFEESIPLEFGELRELEKLDFSDNLLIGTLPSMLGILPKLQLLNLSHNNLTGSIPSSFGRSMSALSTVDISYNQLEGPIPIKPVFYNFDSLRSNRGLCGNVTGLSPCGDSKANGHGHRSKKLLIIFLPLTILLLVVVGAFCIFLLHARNTETKDEEALSHDIYYVWSSNEKISFENIIKATEEFDDRYLIGKGGQGSVYKAKLPTGVIVAVKKLHSISNGEIYSQKAFTSEIRALTEMKHRNIVKLKGFCSHSRYSFLIYEYLEGGSLDNILKDENQATKLDWHKRVNVVKGVANALFHMHHGCSLPIVHRDISSKNVLLTSKYEEARIIDFGTSKFLNPDSNNMTKFAGTFGYAAPEIAYNMEANEKCDVYSFGVLTIEIIMGMHPGELVYSLIEESTTFNLLLKDVLDPRLSLPKKLILDEVVRIAKIAFSCLDKNPRSRPTMEQVSIELERGPKSHVEDPFDTITIGQLMENYTP 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02025 1026 SUPERFAMILY Protein kinase-like (PK-like) 712 997 IPR011009 -
Accr4g02025 1026 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 345 659 - -
Accr4g02025 1026 PRINTS Leucine-rich repeat signature 253 266 - -
Accr4g02025 1026 PRINTS Leucine-rich repeat signature 585 598 - -
Accr4g02025 1026 ProSiteProfiles Protein kinase domain profile. 732 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02025 1026 Pfam Protein kinase domain 736 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02025 1026 Pfam Leucine rich repeat 277 335 IPR001611 GO:0005515
Accr4g02025 1026 Gene3D Phosphorylase Kinase; domain 1 694 810 - -
Accr4g02025 1026 PANTHER LEUCINE RICH REPEAT KINASE 2 295 1002 - -
Accr4g02025 1026 FunFam Leucine-rich repeat receptor protein kinase MSP1 695 810 - -
Accr4g02025 1026 SUPERFAMILY L domain-like 71 340 - -
Accr4g02025 1026 Pfam Leucine Rich Repeat 587 607 IPR001611 GO:0005515
Accr4g02025 1026 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Accr4g02025 1026 FunFam MDIS1-interacting receptor like kinase 2 811 1006 - -
Accr4g02025 1026 ProSitePatterns Tyrosine protein kinases specific active-site signature. 856 868 IPR008266 GO:0004672|GO:0006468
Accr4g02025 1026 SUPERFAMILY RNI-like 309 627 - -
Accr4g02025 1026 Gene3D Transferase(Phosphotransferase) domain 1 811 1014 - -
Accr4g02025 1026 SMART LRR_typ_2 201 226 IPR003591 -
Accr4g02025 1026 SMART LRR_typ_2 104 128 IPR003591 -
Accr4g02025 1026 SMART LRR_typ_2 489 513 IPR003591 -
Accr4g02025 1026 SMART LRR_typ_2 274 298 IPR003591 -
Accr4g02025 1026 SMART LRR_typ_2 537 561 IPR003591 -
Accr4g02025 1026 SMART LRR_typ_2 153 177 IPR003591 -
Accr4g02025 1026 SMART LRR_typ_2 585 609 IPR003591 -
Accr4g02025 1026 FunFam Leucine-rich repeat receptor protein kinase EMS1 243 342 - -
Accr4g02025 1026 ProSiteProfiles Leucine-rich repeat profile. 587 609 IPR001611 GO:0005515
Accr4g02025 1026 Gene3D Ribonuclease Inhibitor 36 197 IPR032675 -
Accr4g02025 1026 FunFam Nuclear pore complex protein NUP107 36 196 - -
Accr4g02025 1026 Gene3D Ribonuclease Inhibitor 349 658 IPR032675 -
Accr4g02025 1026 Gene3D Ribonuclease Inhibitor 214 348 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02025 Accr-Chr4 25310844 25314001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02025 14 910 Receptor kinase-like Gene Family AT4G08850 41.622 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02025 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02025 - - pcin:129318235 1160.21