Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02021 ATGTCTGAAAGTGAATACTTCACCAAGCTTCTAGCATTAATGTGTATTAATCTCTCTATATTCTTCTTTATTGTTGCTTCCTTCACATTCTCTGCTGCTGCTTCTGATCATGGCGAAGCAAAAGCTTTGTTGAACTGGAAAGCCAGGCTTATCAACGAAAGCCAAGCTACTTTGTCTTCTTGGAACAATGTTACTAATCTCTGCAGAAACTGGAAGGGCATTTCATGTGGCAAATTCATGTCTGTGAGCAATATAAATCTCTCAAATCTTGGCCTACAAGGTACACTTGACAATCTCGACTTCGCTTCCTTTCCTAATCTCCAATATTTTGATCTTAGTTACAACCAGTTTCATGGAAACATTCCCCACGAGATTGGTAACTTGTCCAGTGTTTTGATGTTGAATTTGTCGGAGAATCCTTCAATTAGCGGTCCCATTCCTAAAGAAATAGGAAAATTGAGCGCTCTAAGCGTTCTTGATCTTAGCGCGTGTGATCTCACAGAGACAATTCCTAGTGAAATTGGGAACTTGAAGAACCTGACGACTCTAGTCCTTGCTGTAAATTCTCTTTCTGGTCCCATTCCTGAAGAGATTGGAATGTTGAGTAATCTCTTGCAACTTGATTTGTCAGGAAACTCAGTGTTATCTAGTGGAATCCCATCGCCAATTGGAAACTTGAACAAGTTGCAAGAGTTTTATCTCAATGATTGCAATCTCTTTGGTCCTTTACCCAATGAAATTGGAAAACTCAATTTTCTCACACACATTGATTTAGGCCAAAATGAACTTGATGGGCCAATCCCTCCCTCTATAGGAAACTTGACACTTCTCGAGACGTTGGTCTTGTCAAATAACAGTCTTTCTGGCCCAATTCCTGAATCCATCGGCAATGCGATCAGTTTACAAGAAATCTATATAGAATATAACAATCTTTCAGGACCCATTCCTGCCACTATAGGAAACTTGACAAACCTTGACACTTTAGTTTTGATGGGGAACAATCTCAGTGGTCAACTTCCACAAGAAATGAATACCATAAGTTGGCATAATTTACAATTGGGTGATAATCATTTCCATGGCCGTTTGCCACAACAGATTTGTCAAAGTGGGAGGTTATTTAGGTTTGTTGTTAAAAGTAACCAGTTCTCTGGTCCTATTCCAACTAGTTTGAAGAATTGTTCTAATCTAGAAAGACTCGTACTTCAGGATAACCAATTAGTTGATAATATAACAACTGCTTTTGGAGTATATCCTAATTTGGACTACATTGATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCCAAGTGGGGGGAGTGTCAAAATCTCACACAATTGATTATTAACCATAACAAGCTTTCTGGTGATATACCTCCAGAACTAGGAGAGATGACTAAGCTTAGTTTGCTTAACTTGTCTTCAAATCATTTGTCTGGAAAAATTCCTAAAGAATTAGGGAAGTTGATCAAGTTGATGAAACTCTCTTTGAGCCATAATAACTTCTCTGGTAGTGTCCCTTCAAATATAGGATCACTTAGCCAGCTTGAAATTTTGGAGTTAGCTGCAAATAATTTCAATGGCTCAGTCACTAGAGAACTTGGGGAATTGAAAAGTTTAAGGGTCTTGAACTTGAGCAAAAACAAATTTGATGAGAGCATTCCGCTTGAGTTTGGTGAACTCCGAGAACTTGAACAGCTTGATTTGAGTGACAATTTGCTAATTGGAACAATACCATCAATGCTTGCAATATTACCTAAATTGCAACTACTGAATCTCTCACATAATAATCTCACTGGCAGCATTTCTTCCAGTTTCGGTGGACCAATGTCAGCTTTGTCTAATGTTGACATATCATACAATCAATTAGAAGGCCCCATTCCAATCAAACCAGTCTTTCACAACTTTGATTCATTGAGGAATAATAAAGGCTTGTGCGGCAACGTCACTGGTTTAAGTCCTTGTGGTGATTCAAAAACAAATAAGCATGGTCACAAGAGCAAAAAATTCTTGATAATATTCCTCCCATTGACCATACTACTACTCGCAGTGGTTGGAGCTTTTTGTATTTTTCTCCTACGTGCAAGAAATACAAAAACCAAAGATGAAGAAGCAGAAGCAGACGATATTTATTATGTATGGAGTTCCAATGAAAAAATATCGTACGAAAATATCATCAAAGCCACAGAGGAGTTCGATGATAAATATCTCATCGGGAGAGGGGGCCAAGGAAGTGTTTATAAGGCAAAATTGCCTACAGGTGTCATTGTTGCTGTAAAAAAGCTTCATTCAATACCAAATGAGGAAATCTATAGTAGGAAAGCCTTCACAAGTGAGATTCGAGCTTTGACCGAAATCAAACATCGCAACATCGTGAAGTTGAAAGGGTTTTGTTCCCATTCAAGATTCTCCTTTTTAATTTATGAGTACTTGGAAGGTGGTAGCTTGGACAACATACTCAAGGATGACAATCAAGCCACTAAGCTTGATTGGCATAAGAGGATGAATGTTGTTAAAGGTGTAGCTAATGCTTTATTCCATATGCATCATGGATGTTCACTTCCAATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAACTTCTGAATATGAAGAAGCTCGCATCATTGACTTTGGAACATCAAAGTTTTTGAATCCTGACTCAAACAACATGACTACATTTGCTGGTACATTTGGGTATGCTGCTCCAGAGATTGCTTACATTATGGAAGCGAACGAGAAATGTGATGTTTACAGCTTTGGAGTGTTGACTTTGGAGATCATTATGGGAATGCATCCAGGAGAGCTTGTCTCTTCTTTGATAGAGAAATCAACCACCTTTAATTTGTTGTTAAAGGATGTGTTGGATCCACGACTTTCACTGTCTAAAAAACTAATCCTGGATGAGGTTGTCACAATTGCAAAAATAGCATTTTCTTGTTTGGATGAGGATCCTCGATCTCGTCCAACCATGGAACAAGTATCTATAGAGCTGGAACGAAGACCAAAGTCTCATGTGGAAGATCCATTTGACACCATCACAATTGGACAACTAATGGAGAATTAA 3072 0.3831 MSESEYFTKLLALMCINLSIFFFIVASFTFSAAASDHGEAKALLNWKARLINESQATLSSWNNVTNLCRNWKGISCGKFMSVSNINLSNLGLQGTLDNLDFASFPNLQYFDLSYNQFHGNIPHEIGNLSSVLMLNLSENPSISGPIPKEIGKLSALSVLDLSACDLTETIPSEIGNLKNLTTLVLAVNSLSGPIPEEIGMLSNLLQLDLSGNSVLSSGIPSPIGNLNKLQEFYLNDCNLFGPLPNEIGKLNFLTHIDLGQNELDGPIPPSIGNLTLLETLVLSNNSLSGPIPESIGNAISLQEIYIEYNNLSGPIPATIGNLTNLDTLVLMGNNLSGQLPQEMNTISWHNLQLGDNHFHGRLPQQICQSGRLFRFVVKSNQFSGPIPTSLKNCSNLERLVLQDNQLVDNITTAFGVYPNLDYIDLSGNQLYGHLSSKWGECQNLTQLIINHNKLSGDIPPELGEMTKLSLLNLSSNHLSGKIPKELGKLIKLMKLSLSHNNFSGSVPSNIGSLSQLEILELAANNFNGSVTRELGELKSLRVLNLSKNKFDESIPLEFGELRELEQLDLSDNLLIGTIPSMLAILPKLQLLNLSHNNLTGSISSSFGGPMSALSNVDISYNQLEGPIPIKPVFHNFDSLRNNKGLCGNVTGLSPCGDSKTNKHGHKSKKFLIIFLPLTILLLAVVGAFCIFLLRARNTKTKDEEAEADDIYYVWSSNEKISYENIIKATEEFDDKYLIGRGGQGSVYKAKLPTGVIVAVKKLHSIPNEEIYSRKAFTSEIRALTEIKHRNIVKLKGFCSHSRFSFLIYEYLEGGSLDNILKDDNQATKLDWHKRMNVVKGVANALFHMHHGCSLPIVHRDISSKNVLLTSEYEEARIIDFGTSKFLNPDSNNMTTFAGTFGYAAPEIAYIMEANEKCDVYSFGVLTLEIIMGMHPGELVSSLIEKSTTFNLLLKDVLDPRLSLSKKLILDEVVTIAKIAFSCLDEDPRSRPTMEQVSIELERRPKSHVEDPFDTITIGQLMEN 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02021 1023 ProSiteProfiles Protein kinase domain profile. 732 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02021 1023 SMART LRR_typ_2 104 128 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 489 513 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 201 222 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 537 561 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 274 298 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 153 177 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 465 488 IPR003591 -
Accr4g02021 1023 SMART LRR_typ_2 585 608 IPR003591 -
Accr4g02021 1023 Gene3D Ribonuclease Inhibitor 38 191 IPR032675 -
Accr4g02021 1023 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 395 1001 - -
Accr4g02021 1023 Gene3D Ribonuclease Inhibitor 192 252 IPR032675 -
Accr4g02021 1023 FunFam Predicted protein 242 341 - -
Accr4g02021 1023 Gene3D Ribonuclease Inhibitor 347 658 IPR032675 -
Accr4g02021 1023 Pfam Leucine rich repeat 491 550 IPR001611 GO:0005515
Accr4g02021 1023 Pfam Leucine rich repeat 277 335 IPR001611 GO:0005515
Accr4g02021 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 345 659 - -
Accr4g02021 1023 Pfam Leucine Rich Repeat 253 274 IPR001611 GO:0005515
Accr4g02021 1023 Pfam Leucine Rich Repeat 587 607 IPR001611 GO:0005515
Accr4g02021 1023 SUPERFAMILY Protein kinase-like (PK-like) 711 998 IPR011009 -
Accr4g02021 1023 Gene3D Ribonuclease Inhibitor 253 346 IPR032675 -
Accr4g02021 1023 FunFam Nuclear pore complex protein NUP107 36 196 - -
Accr4g02021 1023 FunFam MDIS1-interacting receptor like kinase 2 811 1006 - -
Accr4g02021 1023 ProSitePatterns Tyrosine protein kinases specific active-site signature. 856 868 IPR008266 GO:0004672|GO:0006468
Accr4g02021 1023 Gene3D Phosphorylase Kinase; domain 1 693 810 - -
Accr4g02021 1023 Gene3D Transferase(Phosphotransferase) domain 1 811 1015 - -
Accr4g02021 1023 SUPERFAMILY L domain-like 56 341 - -
Accr4g02021 1023 SUPERFAMILY RNI-like 314 639 - -
Accr4g02021 1023 FunFam Leucine-rich repeat receptor protein kinase MSP1 695 810 - -
Accr4g02021 1023 Pfam Protein kinase domain 734 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02021 1023 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02021 Accr-Chr4 25222999 25226152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02021 24 905 Receptor kinase-like Gene Family AT4G08850 43.709 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02021 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02021 - - pcin:129318235 1192.18