Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02013 ATGTTTGAAGGTGAATACTCCACTAAGCTGCTAGCATTATGGTGTATTATTCTCTTCATATTCTCTTGTGTCACTTCCTTTGCATCTGTTGCTGCAAGAGATAGCGAAGCAAAAGCTCTGTTGAAGTGGAGAGATAGCCTTCACGACGAAAGCAAAGGTACCTTGTCCTCTTGGAAAAATGGCACTGATCCTTGCAGACATTTCTGGAAGGGAGTTTATTGTGACAAATCCACATCTGTGACCAATATAAGTCTCTCAGATCTTGGCCTTCAAGGTACACTTTCCAGTTTCAACTTCGCTGCCTTCCCTAATCTCCTCTACTTCAACATAAGTTCCAACCAATTTCATGGATACATTCCCCGTGAAATTGGCAAGTTGTCAAGTATTTTGACGTTTAGTTTGTTAGAAAATCGAATTGAGGGTCCCATTCCTCTTGAAATCTTTAATCTCACAACTCTAAATAGTCTTGACCTTGGAACATGTAATCTCACAGGACAAATTCCCCGTGAAATTGGGAATTTGAGGAATTTGAATTTCCTATGGCTTGGAGAAAATTCCCTTTCTGGTCCCATTCCTGAAGAGATTGGAATGTTGACCAATCTTTCAATCCTTGATTTGGCAACCACCTCTTTGTCAGGAAGAATCCCTTCATCAATTGGAAACTTGACCATGTTACAAAATCTTTATCTTTATGAGACCAATCTGTGGGGTCCTATTCCAACTGAATTCTGGAAACTCACTTCTCTCATTGAGATTCAATTATATCATAATATATTATCTGGGCCAATCTCTCCCTCTATAGGAAACCTAACAAATCTCCAAGAAGTGTCCTTTTCTGATAACAGATTTTCAGGTCCAATTCCTCCATCCATTGGTAATATGATCAGTCTAGTAGAATTGTATGTAGACTATAACAATCTTTCGGGATCTATTCCTTCCACTATAGGAAACTTGACAAAACTCGATACTCTTGTATTGATAGGGAACAATTTCAGTGGTCAACTTCCACCAGAAATTAATAACATAAGTTGGCATAATTTACAACTTGGCCATAATCATTTCCATGACCATTTGCCTCAACAGATTTGTCAAAGTGGGATACTATATAGGTTCGGTGCTGAACGCAACCAATTCACTGGTCCGATTCCTACTAGTTTGAAGAACTGCTCTAGTCTAAATAGACTCATACTTTATGATAACCAATTAGTTGATAATATAACAGATGCTTTTGGAGTATATCCTCTTTTAGAGTACATTAATCTCAGTGGCAATCAATTGTCTGGCCACCTTTCATCCAGGTGGGGGAAATGTCAAAGTCTCACACAATTGATTATTCACAATAACAAGCTTTCTAGTTATATACCAGCAGAACTAGGAGAGGCAATTAAGCTTCGTGAACTGAACTTGGCTTCTAATCATTTGTCCGGACAAATTCCAAAAGAACTAGGGAAGTTGATCATATTGACAAAACTCTCTTTGAGCAACAATAAATTCTCTGGCAACGTCCCCTCAACTATAAGATCACTTAGTCATCTTGACACTTTGGAATTGGCGGCAAATAATTTCAATGGTTCAATTACAAGCAAGCTTGGGGAATTAGAAAGCTTAAGGGTCTTGAACTTGAGTAGTAACAAATTTGAGGAAAGCATTCCCATTGAGTTTGGTGAACTCCAAGAACTTGAACAACTTGATCTTAGTGACAACTTGCTAATTGGAACAATACCATCAAGGATTGGAATCTTACCCAAATTGCAAGTATTGAATCTCTCACACAATAATCTCACTGGCAACATTCCTTCCAGTTTTAGTGGGTCGATGTCAGCTTTGACTAATGTTGACATATCATACAATCAATTAGAAGGCCCCATTCCAATCAATCCAGCCTTTCACAACTTTGATGCATTGAGGAATAATAAAGGTTTGTGTGGTAATGTCACCAGTTTAAATTTTTGCAGCAATTCACAAACAAATCCACATGGCCATAAGCGCAAAAAGTTCTTGATAATATTCCTTCCCTTGGCCATACTACTACTAGTATTTGTTGGAGGTTCTTTCATTTTTTATCGAGTAGTAACAAAAGCAAAGAACAAAGATGAAGAAGCTCTACAGGAAGATGTTTATTTTGTATGGAGTCTTGAACGAGAAATATTGTACAAAGATGTCATCAAAGCCATAGAGGAGTTTGATGACAAATATCTTATTGGGAAAGGGAGCCAAGGAAGTGTTTATAGGGCAGAGTTGCCTACAGGTGACATTTTTGCTGTAAAGAAGCTTCATTCAATGTCAAGTGGGGAAATCTCCAACCGTAAAGCTTTTACAAGTGAGATTCAAGCTTTGACAGAAATCAAACATCGTAACATTGTAAAGTTATATGGGTTTTTCTCCAATTCACAATTCTCCATTTTGCTTTATGAGTTCTTGAAAGGTGGTAGGTTGGATGACATACTAAAGAATGAGGAACAAGCCACTGAGTTTAACTGGAATAAGAGAGTGAATGTTGTTAAAGGTGTGGCTAATGCTTTGTCCCATATGCATCATGGTTGTTCAACTCCTATTGTTCATCGTGACATATCAAGCAAGAATATTATTATAAGCTCAGAATATGAAGAAGCTCACATCATTGACTTTGGAACTGCAAAGTTTTTGAATCCTAATTCAAACAACATGACCAGATTTGTTGGCACATTCGGCTACGCTGCACCAGAGATTGCTCTCATTATGAAAGCGAATGAGAAATGTGACGTTTATAGTTTTGGAGTACTGACTTTAGAGATCATCATGGGAGAACATCCAATAGAGCTTATTTTATCTTTGGCAGAAGATTCAACCACTAATGACTTGTTGTTAAAGGAAGTGTTGGACCCGCGACTTCATACCTTGAGGAAACCAATTCCACGTGAAGTTGCGTTAGTTGCAAAAATAGCATTTTCTTGCTTGAATGAGAATCCTCAGTGTCGCCCAACCATGGAACAAGTATCTAGAGAGCTCGTAAAGACTTCAAAATCTCATTTGCTGGATCAATTTCACACTATCACCATTGGACAACTCATGAGGGATTGA 3060 0.3797 MFEGEYSTKLLALWCIILFIFSCVTSFASVAARDSEAKALLKWRDSLHDESKGTLSSWKNGTDPCRHFWKGVYCDKSTSVTNISLSDLGLQGTLSSFNFAAFPNLLYFNISSNQFHGYIPREIGKLSSILTFSLLENRIEGPIPLEIFNLTTLNSLDLGTCNLTGQIPREIGNLRNLNFLWLGENSLSGPIPEEIGMLTNLSILDLATTSLSGRIPSSIGNLTMLQNLYLYETNLWGPIPTEFWKLTSLIEIQLYHNILSGPISPSIGNLTNLQEVSFSDNRFSGPIPPSIGNMISLVELYVDYNNLSGSIPSTIGNLTKLDTLVLIGNNFSGQLPPEINNISWHNLQLGHNHFHDHLPQQICQSGILYRFGAERNQFTGPIPTSLKNCSSLNRLILYDNQLVDNITDAFGVYPLLEYINLSGNQLSGHLSSRWGKCQSLTQLIIHNNKLSSYIPAELGEAIKLRELNLASNHLSGQIPKELGKLIILTKLSLSNNKFSGNVPSTIRSLSHLDTLELAANNFNGSITSKLGELESLRVLNLSSNKFEESIPIEFGELQELEQLDLSDNLLIGTIPSRIGILPKLQVLNLSHNNLTGNIPSSFSGSMSALTNVDISYNQLEGPIPINPAFHNFDALRNNKGLCGNVTSLNFCSNSQTNPHGHKRKKFLIIFLPLAILLLVFVGGSFIFYRVVTKAKNKDEEALQEDVYFVWSLEREILYKDVIKAIEEFDDKYLIGKGSQGSVYRAELPTGDIFAVKKLHSMSSGEISNRKAFTSEIQALTEIKHRNIVKLYGFFSNSQFSILLYEFLKGGRLDDILKNEEQATEFNWNKRVNVVKGVANALSHMHHGCSTPIVHRDISSKNIIISSEYEEAHIIDFGTAKFLNPNSNNMTRFVGTFGYAAPEIALIMKANEKCDVYSFGVLTLEIIMGEHPIELILSLAEDSTTNDLLLKEVLDPRLHTLRKPIPREVALVAKIAFSCLNENPQCRPTMEQVSRELVKTSKSHLLDQFHTITIGQLMRD 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02013 1019 SMART LRR_typ_2 533 556 IPR003591 -
Accr4g02013 1019 SMART LRR_typ_2 174 198 IPR003591 -
Accr4g02013 1019 SMART LRR_typ_2 557 579 IPR003591 -
Accr4g02013 1019 SMART LRR_typ_2 294 318 IPR003591 -
Accr4g02013 1019 SMART LRR_typ_2 581 604 IPR003591 -
Accr4g02013 1019 SMART LRR_typ_2 485 508 IPR003591 -
Accr4g02013 1019 SMART LRR_typ_2 437 461 IPR003591 -
Accr4g02013 1019 ProSiteProfiles Leucine-rich repeat profile. 583 605 IPR001611 GO:0005515
Accr4g02013 1019 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Accr4g02013 1019 Gene3D Ribonuclease Inhibitor 187 243 IPR032675 -
Accr4g02013 1019 Pfam Leucine Rich Repeat 583 603 IPR001611 GO:0005515
Accr4g02013 1019 Pfam Leucine rich repeat 510 570 IPR001611 GO:0005515
Accr4g02013 1019 FunFam Leucine-rich repeat receptor protein kinase MSP1 691 806 - -
Accr4g02013 1019 ProSitePatterns Tyrosine protein kinases specific active-site signature. 852 864 IPR008266 GO:0004672|GO:0006468
Accr4g02013 1019 PRINTS Leucine-rich repeat signature 560 573 - -
Accr4g02013 1019 PRINTS Leucine-rich repeat signature 581 594 - -
Accr4g02013 1019 FunFam Leucine-rich receptor-like protein kinase family protein 192 288 - -
Accr4g02013 1019 Pfam Protein kinase domain 730 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02013 1019 Gene3D Phosphorylase Kinase; domain 1 688 806 - -
Accr4g02013 1019 SUPERFAMILY L domain-like 56 359 - -
Accr4g02013 1019 SUPERFAMILY RNI-like 311 654 - -
Accr4g02013 1019 FunFam Nuclear pore complex protein NUP107 33 191 - -
Accr4g02013 1019 SUPERFAMILY Protein kinase-like (PK-like) 709 996 IPR011009 -
Accr4g02013 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 341 655 - -
Accr4g02013 1019 Gene3D Transferase(Phosphotransferase) domain 1 807 1012 - -
Accr4g02013 1019 ProSiteProfiles Protein kinase domain profile. 728 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02013 1019 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Accr4g02013 1019 PANTHER LEUCINE RICH REPEAT KINASE 2 291 1000 - -
Accr4g02013 1019 FunFam MDIS1-interacting receptor like kinase 2 807 1002 - -
Accr4g02013 1019 Gene3D Ribonuclease Inhibitor 345 654 IPR032675 -
Accr4g02013 1019 Gene3D Ribonuclease Inhibitor 244 344 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02013 Accr-Chr4 25029323 25032498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02013 11 901 Receptor kinase-like Gene Family AT4G08850 41.828 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02013 Pkinase 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02013 - - pcin:129295243 1143.26