Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02009 ATGTACCAAAAAACCATGTCTGAAAGAGATTCCACTTCGCTGCTGCTAGCATTATTGTTGTCTGTTGCTTCCTTTGCATCTGTTGCTGCTGGAGATGGCGAAGCAAAAGCTCTGTTGAACTGGAGAGATAGTTTAAACGACGAAAGCAAATCTACCTTGTCCTCTTGGAGCAATCACACTAATCTTTGCAAAAACTGGAAGGGGATTTCATGCGACAAATCTATGTCTGTGATCAACATAAGTCTCTCAAATCTTAACCTTCAAGGTACACTTTCCAGTCTCAACTTCGCTGCCTTTCCTAATCTCCTCTACTTCGACATAAGCTTGAACCAATTATATGGATGGATTCCCCGCGAAATTGGTAATTTGTCCAGTCTTTTGATCCTGGGTTTGTCAGATAATTCATTTAGCGGTCCCATTCCTCCTGAAATCTGGAATCTAACCACTCTAAATAAACTTGATCTTACTACATGTAAATTCACAGGACAAATTCCCCATGAAATTGGGAATTTGAAAATTTTGAATTTCCTGGCGCTTGGAGATAATTTCCTTTCTGGTTCCATTCCTGAAGAAATTGGAATGTTGAGCAATCTTTCACATCTTCATTTGGGAAACAACTCTCTGTCAGGGAGAATCCCATCATCAATAGGAAACTTGACCATGTTACAACATCTTTTTCTTTATATGAACAATCTAGCAGGTCCGATTCCTAATGAATTATGGAAACTCTATTATCTCAATAACATTCAGTTATATGTTAATAGACTTTCTGGGCCAATCTCTCCCTCTATAGGAAACCTAACAAATCTGGAAATATTGGCCTTTACTAATAACCGATTTTTTGGTCCACTTCCTCCATCCATTGGTAACTTGATCAATTTATGGCATGTCAGCCTTCCATCCAACAATCTTTCAGGCCTTATTCCTCCCACTATAGGAAATATGACAAAGCTCAAAGTCCTGCAGCTGGAAAACAACAGTTTCAGTGGTCAGCTTCCACAAGAAATGAATAACTTGACAAGTTTGCAAAGCGTAAACCTGTTTGATAATAATTTCAGTGGACCTTTGCCCCAAAACATTTGTCAAAGTGGGATGTTAGCAAACTTTTCTGCTTTCAATAACCATTTCACTGGTCCTATTCCAAAAAGTTTGAAGGATTGTTCAAGTCTCAGAAGACTCAGGCTTCAAAATAATCAAATAGCTGATAATATAACAGATGCTTTTGGAGTATATACTTCTTTGGACTACATTGATCTAAGTGGTAATCAATTGTATGGCCACCTTTCATCTAAGTGGGGGAAGTGTCATAATCTCACTGGATTGATTATTCACAGTAACAAGCTTTCTGGTGATATACCACCAGAATTAGGAGAGGCAACTAAGCTTGGCTTAATTAACTTGACTTCAAATCATTTGTCTGGAAAAATCCCAAATGAAATTGGGAAGTTGATTGAGTTGGTGCAACTCTCTTTAAGCCACAATAACCTCTCTGGCAGTATTCCCTCAAATATGAGATCACTTAGTCGACTTGATACTTTAGAGTTAGCAGCAAATAATTTCAACGGCTCAATCCCAAGAGAGCTAGGGGAACTAAAAAGCTTAATTGTATTGAACTTGAGCAAAAACAAATTTGATGAAAGGATTCCCCTTGAGTTTGGTGAACTCCTAGACCTTGAACAGCTTGATCTTAGTCACAATTCGCTAATTGGAACAATACCATCAAGGCTTGGAATGTTAACCAAATTGCAATTACTAAACCTCTCACACAATAATCTCACTGGCAGAATTCCTTCCGGTTTTAGTGGATCGATGTCAGCCTTGTCTACTGTTGACATATCATACAATCTATTAGAAGGCCCTGTTCCAACCAAACCGGCATTTCACAACCTTGATGCATTGAGAAATAATAAAGGTTTATGCGGTATTGTTGGCCTAAGTCCGTGTGGTGATTCCCAAACAAATGGACGTGGCCACAAGAGCAAAAAGTTCTTGATAATATTCCTCCCATTATTGGTTATACTGCTATTAGTACTTGTTGGAGCATTTTTCATTTGTTCTCGAAAAGCAACAAAAGCAAAAAACAAAGATGATGAAAAAATTCCGCCCGAAGATGATTATTTTGTATGGAGTTTTGAAAGAGAAATATTGTATGAAGATCTTATTGAAGCCACAAAGGGATTTGATGAAAGATATCTGATTGGCCAAGGGAGCCAAGGAAGCGTTTATAGGGCGGAGTTGCCTACAGGTGACATTTTTGCTGTAAAGAAGCTCCATTCAATTCCAAGTGGGGAAATCTCCAACCAGAAAGCTTTTAAAAGTGAGATTCAAGCCTTAACAGAAATCAAACATCGGAACATTGTGAAGCTATATGGATTTCACCACAATTCACAATTCTCTATTTTGGTTTATGAGTTCTTAGAAGGTGGCAGCTTGGATAATATACTAAAAAATCATAAACAAGCCACTGAGTTTGATTGGAATAAGAGGGTGAACATTGTAAAAGGTGTGGCAAATGCTTTATTCCATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTTAGTTCAGAATATAATGAAGCTCGCATCATTGACTTTGGAACAGTGAAGTTTTTGAATCCTAACTCAAACAATATGACCACATTTGCTGGCACATTTGGGTATGCTGCACCAGAGATTGCTTTCATTATGAAAGCGAACGAGAAGTGTGATGTTTATAGCTTTGGAGTGTTGACTTTAGAAATCATCATGGGAAAACATCCAGCTGAGCTTATTTCATCTTTGGCAGAGAATTCAAACATGAATGATTTGCTATTAAAGGATATGTTGGACCCACGACTTTCTCCACTCACAAAACCAATCTTAGATGATGTGATCTTAGTTGTAAAAATAGCTTTTTCTTGTTTGAATGAGACTCCTCAGTTTCGTCCAACCATGGAACAAGTATCCACTGAATTTGCAAAGACACCAAAATCTTATTCAGAGGATCAGTTTCATACCATCACAATTGGACAACTAATGAGGGATTGA 3057 0.3781 MYQKTMSERDSTSLLLALLLSVASFASVAAGDGEAKALLNWRDSLNDESKSTLSSWSNHTNLCKNWKGISCDKSMSVINISLSNLNLQGTLSSLNFAAFPNLLYFDISLNQLYGWIPREIGNLSSLLILGLSDNSFSGPIPPEIWNLTTLNKLDLTTCKFTGQIPHEIGNLKILNFLALGDNFLSGSIPEEIGMLSNLSHLHLGNNSLSGRIPSSIGNLTMLQHLFLYMNNLAGPIPNELWKLYYLNNIQLYVNRLSGPISPSIGNLTNLEILAFTNNRFFGPLPPSIGNLINLWHVSLPSNNLSGLIPPTIGNMTKLKVLQLENNSFSGQLPQEMNNLTSLQSVNLFDNNFSGPLPQNICQSGMLANFSAFNNHFTGPIPKSLKDCSSLRRLRLQNNQIADNITDAFGVYTSLDYIDLSGNQLYGHLSSKWGKCHNLTGLIIHSNKLSGDIPPELGEATKLGLINLTSNHLSGKIPNEIGKLIELVQLSLSHNNLSGSIPSNMRSLSRLDTLELAANNFNGSIPRELGELKSLIVLNLSKNKFDERIPLEFGELLDLEQLDLSHNSLIGTIPSRLGMLTKLQLLNLSHNNLTGRIPSGFSGSMSALSTVDISYNLLEGPVPTKPAFHNLDALRNNKGLCGIVGLSPCGDSQTNGRGHKSKKFLIIFLPLLVILLLVLVGAFFICSRKATKAKNKDDEKIPPEDDYFVWSFEREILYEDLIEATKGFDERYLIGQGSQGSVYRAELPTGDIFAVKKLHSIPSGEISNQKAFKSEIQALTEIKHRNIVKLYGFHHNSQFSILVYEFLEGGSLDNILKNHKQATEFDWNKRVNIVKGVANALFHMHHGCSIPIVHRDISSKNVLLSSEYNEARIIDFGTVKFLNPNSNNMTTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLTLEIIMGKHPAELISSLAENSNMNDLLLKDMLDPRLSPLTKPILDDVILVVKIAFSCLNETPQFRPTMEQVSTEFAKTPKSYSEDQFHTITIGQLMRD 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02009 1018 FunFam Nuclear pore complex protein NUP107 31 189 - -
Accr4g02009 1018 FunFam Leucine-rich repeat receptor protein kinase MSP1 689 805 - -
Accr4g02009 1018 Pfam Protein kinase domain 731 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02009 1018 FunFam MDIS1-interacting receptor like kinase 2 806 1001 - -
Accr4g02009 1018 SUPERFAMILY RNI-like 248 616 - -
Accr4g02009 1018 Gene3D Ribonuclease Inhibitor 247 362 IPR032675 -
Accr4g02009 1018 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Accr4g02009 1018 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 340 652 - -
Accr4g02009 1018 Pfam Leucine Rich Repeat 197 219 IPR001611 GO:0005515
Accr4g02009 1018 Pfam Leucine Rich Repeat 581 601 IPR001611 GO:0005515
Accr4g02009 1018 SUPERFAMILY Protein kinase-like (PK-like) 702 992 IPR011009 -
Accr4g02009 1018 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 286 - -
Accr4g02009 1018 Gene3D Transferase(Phosphotransferase) domain 1 806 1012 - -
Accr4g02009 1018 Gene3D Phosphorylase Kinase; domain 1 687 805 - -
Accr4g02009 1018 ProSitePatterns Tyrosine protein kinases specific active-site signature. 851 863 IPR008266 GO:0004672|GO:0006468
Accr4g02009 1018 Gene3D Ribonuclease Inhibitor 363 656 IPR032675 -
Accr4g02009 1018 SUPERFAMILY L domain-like 34 299 - -
Accr4g02009 1018 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 256 993 - -
Accr4g02009 1018 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Accr4g02009 1018 Gene3D Ribonuclease Inhibitor 188 246 IPR032675 -
Accr4g02009 1018 PRINTS Leucine-rich repeat signature 579 592 - -
Accr4g02009 1018 PRINTS Leucine-rich repeat signature 558 571 - -
Accr4g02009 1018 SMART LRR_typ_2 339 363 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 531 555 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 315 338 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 579 602 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 195 219 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 267 291 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 483 507 IPR003591 -
Accr4g02009 1018 SMART LRR_typ_2 123 147 IPR003591 -
Accr4g02009 1018 ProSiteProfiles Protein kinase domain profile. 727 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02009 Accr-Chr4 24595733 24598895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02009 9 904 Receptor kinase-like Gene Family AT4G08850 41.863 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02009 Pkinase 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02009 - - pcin:129295243 1142.49