Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02003 ATGACCTCATTCGCTGGCACCTATGGTTATGCTGCTCCAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGCGATGTTTACAGTTTTGGTGTTCTCACGCTAGAAATTCTAATGGGAAGACATCCAGCAGAATTGACTTGTTTTGGGACACATATTTCCACTTCCTATAGTTTGCCACTTAAGAATGTGTTGGATCAGCGACTTCCTCCACCCTCAAACCTAGTTGCTGAGGAAGTAATGTTGATTGCAAAAATAGCACTTGCTTGCTTGAATGAAGATCCTCGATCCCGACCAACCATGGAACAAGTATCTTCAATACTTATGAGGCCTAAACCTTTTTCAGTGAACCAGTTCAACAACATAACACTTGGACAACTCATGCCAGTTTAA 393 0.4122 MTSFAGTYGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPAELTCFGTHISTSYSLPLKNVLDQRLPPPSNLVAEEVMLIAKIALACLNEDPRSRPTMEQVSSILMRPKPFSVNQFNNITLGQLMPV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02003 130 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02003 130 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Accr4g02003 130 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02003 130 PANTHER LEUCINE RICH REPEAT KINASE 2 1 113 - -
Accr4g02003 130 SUPERFAMILY Protein kinase-like (PK-like) 1 110 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02003 Accr-Chr4 24348157 24348647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02003 1 108 Receptor kinase-like Gene Family AT5G65700 38.261 1.03e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g02003 Pkinase 8.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02003 - - pcin:129317095 200.29