Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02000 539 SMART finulus 349 398 IPR011598 GO:0046983
Accr4g02000 539 MobiDBLite consensus disorder prediction 188 252 - -
Accr4g02000 539 MobiDBLite consensus disorder prediction 188 358 - -
Accr4g02000 539 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 343 392 IPR011598 GO:0046983
Accr4g02000 539 MobiDBLite consensus disorder prediction 341 358 - -
Accr4g02000 539 Gene3D - 339 399 IPR036638 GO:0046983
Accr4g02000 539 PANTHER TRANSCRIPTION FACTOR PIF3 14 500 IPR044273 GO:0003700|GO:0006355
Accr4g02000 539 MobiDBLite consensus disorder prediction 279 300 - -
Accr4g02000 539 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 340 407 IPR036638 GO:0046983
Accr4g02000 539 MobiDBLite consensus disorder prediction 519 539 - -
Accr4g02000 539 CDD bHLH_AtPIF_like 343 406 IPR047265 -
Accr4g02000 539 MobiDBLite consensus disorder prediction 304 324 - -
Accr4g02000 539 FunFam Basic helix-loop-helix transcription factor 338 401 - -
Accr4g02000 539 Pfam Helix-loop-helix DNA-binding domain 347 393 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02000 Accr-Chr4 24249882 24252921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02000 3 96 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G59060 35.922 5.03e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr4g02000 HLH 1.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02000 K16189 - gmx:100784531 647.506