Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01999 ATGTCTGAAAGAGATTATTCCACCAAGCTGCTGCTAGCTTTATTCTTGTGTGTTGCTTCCTTTATTGCATCTGTTGCTGCACGAGATAGCGAAGCAAAAGCTCTTTTGAACTGGAGAGCTAGCTTTAACGACGAAAGCAAAGCTACCTTGTCCTCTTGGAAAAATGGTACTGATCCTTGCAGACAGTTCTGGAGGGGAATTTCATGTGACAAATCCATGTCTGTGACCAATATAAGTCCCTCACTTCTTTACCTTCAAGGTACACTTTCCAGTCTCAACTTCACTGCCTTCCCTAATCTCCTCTACTTCGACATACGTTACAACCAATTTGATGGATACATTCCCCAAGAAATTGGTAAGTTGTCAAAACTTTTGGTGTTGGATTTGTCTGATAATCCAATTAGCGGTCCCATTCCCCCTGAAGTCTGCAATATAACCACGCTAAATATTCTTGATATTAGTACATGTAATCTCACAGGAAAAATTCCCCATGAAATTGGGAATTTGAGGAATTTGAATCTCTTATGGCTTGGAGAAAATTCCCTTTCTGGTCCCATTCCTCAAGAGATTGGAACGTTGAGCAGTCTTGTAGACCTTTTTTTGGGAACCAACTATCTTTCAGGGAGAATCCCTTCATCAATTGGAAACTTGACCAAGCTACAGTATCTTTATCTATATCAGAACAATCTAACTGGTCCTGTTCCTACTGAATTATGGAAACTCTCTTCTCTCGTCATCATTCAATTACGTTCTAATAGATTTTCTGGGTCAATCTCTCCCTCCTTAGGAAACCTAACAAATCTCGAACAACTGGCCTTTTCTAATAACAGATTGTCCGGTCCAGTTCCTCCATCCATTGGTAACTTGATTAATTTAGATCTTTTCAGCCTTGAAAACAACAATCTTTCAGGATGTATTCCTTCCACTATAGGAAATATGACAAAGCTCACGCGCCTGTACTTGTACTACAACAGTTTCAGTGGTCAACTTCCACAAGAAATGAATAACTTGACGAGTTTGATTAATATACAACTGGGTGATAATCATTTCAACGGTCCTTTGACACAAAAAATTTGTCAAAGTGGGATGTTACTTTACGTTGGTGCTGATGTTAACCATTTCAGTGGTCCTGTTCCAGCGAGTTTGAAGAATTGTTCAAGTCTAAAAATACTCTGGGTTAATAATAACCACATAGTTGATAATATAACAGATGCTTTTGGAGTATATCCTTCTTTGCACTACATTAATCTAGGTGATAATCAATTGTATGGCCACCTTTCATCCAATTGGGGAAAGTGTCATTCTCTCACACATTTGATGGTTTACAATAACAATCTTTCTGGTGATATACCACCAGAATTAGGAAACGCAGCTAATCTTGGTTTCCTCAACTTGTCTTCAAATCATTTGTCTGGACAAATTCCAAAAGAACTTGGAAAGTTAATCCTGTTGACAGAACTCTCTTTGAGCCACAATAACTTCTCTAGTAATATTCCCTTAAATATAAGATATATTAATCAACTTCAAATTTTGGAGTTGGCAGCAAATAATTTTAGTGGCTCAATCACAAGAGAGCTTGGGGAACTGAAAAGTTTAAGGGTCATGAACTTAAGCAAAAACAAATTTGATGAAAGCATTCCCCTTGAGTTTGGTGAACTCCAATCCCTTGAAAAACTTGATCTTAGTGACAATTTGCTAGTTGGAACAATACCATCAACGCTTGGAGCGTTACTCCAATTGCAAGTATTGAACCTCTCACACAATAATCTCACTGGCACCATTCCTTCCATTTTCAATGTATCAATATCAGCTTTGTTTGTTGTTGACATATCATACAATCAATTAGAAGGCCCTATTCCTGTCAAACCAGCCTTTAAGAACTTTGATGCATTGAGGAATAATAAAGATCTGTGTGGCAAGGTCACTGGTTTAAGTCCTTGTGGCGATTCACAAACAAATCGACATGCTCATAAGAGCAGAAAGTTCTTGATAATATTCCTCCCATTGGCCATACTGCTATTAATACTTGCTGGAGCCTCTTTCCTTTCTTACCTGATAGCAACAAAAAAAGAGAACAATGATAAAGAAGCTCTACCCGAAGATGTCTTTTTTGTACAGAGTCTTGAAAGAGAAATATTGTACAAAGATATCATCAAAGCCACCGAGGGGTTTGACAACAAATATCTTATTGGGAAAGGGAGCCAAGGAAGTGTTTATAGGGCTGAGTTGCCTACAGGTCATGTTTTTGCTGTAAAGAAGCTTCACTCAATGGCAAGTGGGGAACTCTCTAACCAAAAAGCTTTCACAAGTGAGATTCAAGCTTTGACAGAAATCAAACATCGTAATATTGTGAAGTTGTATGGGTTTTCCTCCAATTCACCATTCTTCATTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGATAAAATACTAAAGAATCAAGAACAAGTTGCAGAGTTTGACTGGAACAAGAGGGTGAATGTTGTTAAAGATGTGGCTAATGGTTTATTCCATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTAAATATGATGAAGCTCACATCATAGACTTTGGAACAGCGAAGTTCTTGAATCGTAGCTCAAGCAATATGACAACATTCATTGGCACATTCGGGTATGCTGCCCCAGAGATTGCCTTCATTATGAAAGCGAATGAGAAATGCGATGTATACAGCTTTGGAGTGTTGACTTTAGAAATCATCATGGGTGGACACCCTGCAGAGCTTCTTTCATACTTGGCTGAGAAACCAACCAATTATGACTTGTTATTCAAGGATGTGGTGGACCCACGACTTTCTATCTTTAGATATAAAAAACCAATTCTAGATGAAGTCGCCTTAGTTGCAAAAATAGCATTTTCTTGCTTGGATGAGAATCCTCATTCTCGTCCAACCATGGAACAAGTATATACAGATCTTGTAAGGACTCCAAAATCTTATTTGCCGGCTCAATTTCACACTATCACAATTGGACAACTCATTAGGAATTGA 3054 0.3818 MSERDYSTKLLLALFLCVASFIASVAARDSEAKALLNWRASFNDESKATLSSWKNGTDPCRQFWRGISCDKSMSVTNISPSLLYLQGTLSSLNFTAFPNLLYFDIRYNQFDGYIPQEIGKLSKLLVLDLSDNPISGPIPPEVCNITTLNILDISTCNLTGKIPHEIGNLRNLNLLWLGENSLSGPIPQEIGTLSSLVDLFLGTNYLSGRIPSSIGNLTKLQYLYLYQNNLTGPVPTELWKLSSLVIIQLRSNRFSGSISPSLGNLTNLEQLAFSNNRLSGPVPPSIGNLINLDLFSLENNNLSGCIPSTIGNMTKLTRLYLYYNSFSGQLPQEMNNLTSLINIQLGDNHFNGPLTQKICQSGMLLYVGADVNHFSGPVPASLKNCSSLKILWVNNNHIVDNITDAFGVYPSLHYINLGDNQLYGHLSSNWGKCHSLTHLMVYNNNLSGDIPPELGNAANLGFLNLSSNHLSGQIPKELGKLILLTELSLSHNNFSSNIPLNIRYINQLQILELAANNFSGSITRELGELKSLRVMNLSKNKFDESIPLEFGELQSLEKLDLSDNLLVGTIPSTLGALLQLQVLNLSHNNLTGTIPSIFNVSISALFVVDISYNQLEGPIPVKPAFKNFDALRNNKDLCGKVTGLSPCGDSQTNRHAHKSRKFLIIFLPLAILLLILAGASFLSYLIATKKENNDKEALPEDVFFVQSLEREILYKDIIKATEGFDNKYLIGKGSQGSVYRAELPTGHVFAVKKLHSMASGELSNQKAFTSEIQALTEIKHRNIVKLYGFSSNSPFFILVYEFLEGGSLDKILKNQEQVAEFDWNKRVNVVKDVANGLFHMHHGCSIPIVHRDISSKNVLLSSKYDEAHIIDFGTAKFLNRSSSNMTTFIGTFGYAAPEIAFIMKANEKCDVYSFGVLTLEIIMGGHPAELLSYLAEKPTNYDLLFKDVVDPRLSIFRYKKPILDEVALVAKIAFSCLDENPHSRPTMEQVYTDLVRTPKSYLPAQFHTITIGQLIRN 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01999 1017 Gene3D Phosphorylase Kinase; domain 1 684 802 - -
Accr4g01999 1017 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 297 995 - -
Accr4g01999 1017 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 264 333 - -
Accr4g01999 1017 FunFam Nuclear pore complex protein NUP107 28 188 - -
Accr4g01999 1017 SMART LRR_typ_2 121 145 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 265 289 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 217 241 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 577 600 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 481 504 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 529 552 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 313 337 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 169 193 IPR003591 -
Accr4g01999 1017 SMART LRR_typ_2 553 576 IPR003591 -
Accr4g01999 1017 ProSitePatterns Tyrosine protein kinases specific active-site signature. 848 860 IPR008266 GO:0004672|GO:0006468
Accr4g01999 1017 Gene3D Ribonuclease Inhibitor 310 650 IPR032675 -
Accr4g01999 1017 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Accr4g01999 1017 Pfam Leucine rich repeat 195 254 IPR001611 GO:0005515
Accr4g01999 1017 Gene3D Ribonuclease Inhibitor 193 309 IPR032675 -
Accr4g01999 1017 FunFam Leucine-rich repeat receptor protein kinase MSP1 687 802 - -
Accr4g01999 1017 ProSiteProfiles Leucine-rich repeat profile. 579 601 IPR001611 GO:0005515
Accr4g01999 1017 Gene3D Transferase(Phosphotransferase) domain 1 803 1004 - -
Accr4g01999 1017 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Accr4g01999 1017 SUPERFAMILY RNI-like 296 617 - -
Accr4g01999 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 338 651 - -
Accr4g01999 1017 Pfam Protein kinase domain 726 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01999 1017 SUPERFAMILY L domain-like 87 354 - -
Accr4g01999 1017 ProSiteProfiles Protein kinase domain profile. 724 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01999 1017 SMART LRR_sd22_2 265 291 - -
Accr4g01999 1017 SMART LRR_sd22_2 553 587 - -
Accr4g01999 1017 SMART LRR_sd22_2 385 404 - -
Accr4g01999 1017 SMART LRR_sd22_2 217 243 - -
Accr4g01999 1017 SMART LRR_sd22_2 313 345 - -
Accr4g01999 1017 SMART LRR_sd22_2 121 147 - -
Accr4g01999 1017 SUPERFAMILY Protein kinase-like (PK-like) 706 994 IPR011009 -
Accr4g01999 1017 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 192 261 - -
Accr4g01999 1017 Pfam Leucine Rich Repeat 579 598 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01999 Accr-Chr4 24192496 24195636 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01999 4 901 Receptor kinase-like Gene Family AT4G08850 40.768 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr4g01999 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01999 - - pcin:129295243 1092.41