Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01998 ATGAGTTCCCTGGGCTTGTCCCGCAAAGTAGCTACTGAAGTATCCAAAAAGGTTCAATTGAAAGACCCTAATCAACCCAATTCAGTGCTTAATCTTTTTAGGAGTTATGGATTCTCAGATACCCAGATATATACCGTTGTGACAATGCATCCACGGGTGCTTTTATCTAAACCTGAGAAGAACCTTTTGCCCAGGTTAAGATTCCTTCAGTCAATTGGGTTTTCAAGTGCTGAACTCCAAGATCTCATCATTTCAAACTATGGTCTCCTCAGGGTGAGCTTAGAACAATATATAATCCCTTGTTATGAGGCCCTTAAGAGTTTTCTTCATGACGATAAGGAAGCAAAAATAGCTTTAAAACGCTTAAGGCGGTTTTGTTCCCGCAAGACTGTGACAAATATAGCTCAAAATATAAAGGTTTTGAGAGATATTGGAGTTCCCCAATCGTCTGTCTCTCTACTGGTGGCAAAATTTGTACATTTAGCATTTGTGGATCATGCAAAGTTTGTTGAATATGTGAAGTTTGCAGAGGAAGCAGGAGTTGATCCTTCCAAATCTATGTTTATTAATGCTGTCTCTGTTTTATCTCAGTTAAAGAAATCTACATGGCAGTCTAAACTGGATATCTTCAAGAAATATGGTTGGACCAGAAATGTCACTCTTTCGGCCTTCAGCAAACATCCACAATGCTTGATGCTGTCTAAGGAGAATATCACAAAGTCGATGTCATTTCTTGTGGATGAAGTTGGTATGCCATTGAAAGATATAGCCAGACGCCCAAGTTTACTTCATTATAGTTTGGAGCAGAGGATTATTCCTCGATATTCAGTAATTAAAGCTTTGAAAAAGAAAGGTTTGGTAAAGAGGGAAATCTCCTTCATTTCCATTGTTCGTTATGGTGAGAAAAAGTTTCTTGAGAAATTTGTGACCAGATTTCACACCAGTGTTCCTCAGCTATTGAACATCTACAAAGGACCTTCAGGACCTTTACCTCAAGTTCAGTGA 1005 0.3871 MSSLGLSRKVATEVSKKVQLKDPNQPNSVLNLFRSYGFSDTQIYTVVTMHPRVLLSKPEKNLLPRLRFLQSIGFSSAELQDLIISNYGLLRVSLEQYIIPCYEALKSFLHDDKEAKIALKRLRRFCSRKTVTNIAQNIKVLRDIGVPQSSVSLLVAKFVHLAFVDHAKFVEYVKFAEEAGVDPSKSMFINAVSVLSQLKKSTWQSKLDIFKKYGWTRNVTLSAFSKHPQCLMLSKENITKSMSFLVDEVGMPLKDIARRPSLLHYSLEQRIIPRYSVIKALKKKGLVKREISFISIVRYGEKKFLEKFVTRFHTSVPQLLNIYKGPSGPLPQVQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01998 334 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 SMART mt_12 253 287 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 Pfam mTERF 30 182 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 Pfam mTERF 197 305 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 Gene3D Transcription termination factor 3, mitochondrial 88 315 IPR038538 -
Accr4g01998 334 PANTHER CGI-12 PROTEIN-RELATED 3 311 IPR003690 GO:0003690|GO:0006355
Accr4g01998 334 FunFam Mitochondrial transcription termination factor-like 94 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01998 Accr-Chr4 24115466 24116470 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01998 mTERF 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01998 K15031 - gmx:106799612 299.286