Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01997 ATGCTTGCTTTTCTCATTACAAGATTATCTTCATCACTATCTTTGAAGAGTAGGATTCAACTTGGTCTCCTACATCATAATGCTTCCCACTTTTTCAATTCCTTCTCCTCAGCTTCGACATTGTCTGAATCAAATCAAGGAAAACGAAAACTAATTACTGTTTCGTATCTCATGAGTTCCCTGGGCTTGTCCCGCAAAGTAGCTACTGAAGTATCCAAAAAGGTTCAATTGAAAGACCCTAATCAACCCAATTCAGTGCTTAATCTTTTTAGGAGTTATGGATTCTCAGATACCCAGATATATACCGTTGTGACAATGCATCCACGGGTGCTTTTATCTAAACCTGAGAAGAACCTTTTGCCCAGGTTAAGATTCCTTCAGTCAATTGGGTTTTCAAGTGCTGAACTCCAAGATCTCATCATTTCAAACTATGGTCTCCTCAGGGTGAGCTTAGAACAATATATAATCCCTTGTTATGAGGCCCTTAAGAGTTTTCTTCATGACGATAAGGAAGCAAAAATAGCTTTAAAACGCTTAAGGCGGTTTTGTTCCCGCAAGACTGTGACAAATATAGCTCAAAATATAAAGGTTTTGAGAGATATTGGAGTTCCCCAATCGTCTGTCTCTCTACTGGTGGCAAAATTTGTACATTTAGCATTTGTGGATCATGCAAAGTTTGTTGAATATGTGAAGTTTGCAGAGGAAGCAGGAGTTGATCCTTCCAAATCTATGTTTATTAATGCTGTCTCTGTTTTATCTCAGTTAAAGAAATCTACATGGCAGTCTAAACTGGATATCTTCAAGAAATATGGTTGGACCAGAAATGTCACTCTTTCGGCCTTCAGCAAACATCCACAATGCTTGATGCTGTCTAAGGAGAATATCACAAAGTCGATGTCATTTCTTGTGGATGAAGTTGGTATGCCATTGAAAGATATAGCCAGACGCCCAAGTTTACTTCATTATAGTTTGGAGCAGAGGATTATTCCTCGATATTCAGTAATTAAAGCTTTGAAAAAGAAAGGTTTGGTAAAGAGGGAAATCTCCTTCATTTCCATTGTTCGTTATGGTGAGAAAAAGTTTCTTGAGAAATTTGTGACCAGATTTCACACCAGTGTTCCTCAGCTATTGAACATCTACAAAGGACCTTCAGGACCTTTACCTCAAGTTCAGTGA 1176 0.3827 MLAFLITRLSSSLSLKSRIQLGLLHHNASHFFNSFSSASTLSESNQGKRKLITVSYLMSSLGLSRKVATEVSKKVQLKDPNQPNSVLNLFRSYGFSDTQIYTVVTMHPRVLLSKPEKNLLPRLRFLQSIGFSSAELQDLIISNYGLLRVSLEQYIIPCYEALKSFLHDDKEAKIALKRLRRFCSRKTVTNIAQNIKVLRDIGVPQSSVSLLVAKFVHLAFVDHAKFVEYVKFAEEAGVDPSKSMFINAVSVLSQLKKSTWQSKLDIFKKYGWTRNVTLSAFSKHPQCLMLSKENITKSMSFLVDEVGMPLKDIARRPSLLHYSLEQRIIPRYSVIKALKKKGLVKREISFISIVRYGEKKFLEKFVTRFHTSVPQLLNIYKGPSGPLPQVQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01997 391 Pfam mTERF 254 362 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 Pfam mTERF 87 239 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 SMART mt_12 310 344 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 SMART mt_12 29 64 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 SMART mt_12 173 204 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 Gene3D Transcription termination factor 3, mitochondrial 144 372 IPR038538 -
Accr4g01997 391 PANTHER CGI-12 PROTEIN-RELATED 53 368 IPR003690 GO:0003690|GO:0006355
Accr4g01997 391 FunFam Mitochondrial transcription termination factor-like 151 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01997 Accr-Chr4 24115466 24116641 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01997 mTERF 4.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01997 K15031 - qsu:111998476 318.931