Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01989 ATGAGCCTGGTATGGGTGCTGCTTCAGAAACAAGGGAATGGTGAGGTCCAGCAGGTTCAGTTGCCATCTAATCCTGATGCTCTTCAAGGACTTAATCTCTCCGTCAGTTACATAAACAATCAAAGCCAGTTCATGTACGTGTCCTTAAGAGATCCAGAGGATATAAAAGGTTGTAATGCCAGACTCTTTCTACAACGCTGTCTCTACAATTCGTCTATTTATCCTTTTGAGTATGAGGTGATTGAAGAAGACAATGTTACTTTCTTCAATTGTTCTTCCGCCTGGTCCATATATGGCTCCAGATCCTGCCCCATTCTTGCTTTTGGCTCCCAGGAAAGTGTCCTGTCAGAGAACCATAACCTTACTTCCTGCACCATGATCTCACGATTACATTCGCTAATACCGGCAGAATATCTTCAGAACAACGAATTTCACCTCAAATGGATGTTCCAACCAAAAGTTGAAAGCCACAAAACCAGAATTATTTTATCAAGCACAGGTTCCATTGTGCTGCTTTTGTTGTTGGTTGTGTGCTTCTACATATGCCGCTACTTCAAGCACAAAGGCGAAGACCAAGTCAGACTTGAAACGTTTTTGAAGGATTACCAGGCACTTAAGCCTACCAGATTCTCTTATGCTGGTATTAAAAGAATCACCCACAAATTCAAGGATAAATTAGGTGAAGGTGCACATGGAACTGTCTTTAAAGGTAAGTTATCTACTGAAATTCAAGTAGCTGTCAAAGTACTCAATAATTCAGATCATGATAGAAAAGACTTCATTAATGAAATGGGAACAATGGGCAAAATTCATCACATCAATATTGTTCGTTTGTTGGGCTTTTGTGCTGATGGTTGTCACCGAGCTCTTGTTTATGACTTCTTTCCAAACGGTTCCCTCCAAAAGTTCATCTCTTACCCGAACAACAAAGAAATTTTCTTGGGATGGTCAAAATTGCAACAAATTGCTCTTGATATAGCAAAGGGGATTGAATATCTTCATCAAGGCTGTGATTATAGAATCCTTCATTTTGACATAAATCCTCATAATGTCTTATTAGATAACAATTTCACCCCCAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAGATCAAAGTACTGTATCAATGACTGCAGCAAAAGGAACCCCGGGATATATTGCACCAGAGGTTTTCTCTCGAAACTTTGGAAATGTGTCGTACAAATCAGATATTTATAGTTATGGAATGCTACTCTTAGAAATGGTTGGTGGAAGGAAAAATATTGACACAAATCAAGTTCTATATCCAGAATGGATCCACAATTTGATTGAAAGAGGAGAGGCAGTAAGTATCTACATAGAAGATGAAGTTGACATTAGAATTGCTAAAAAACTAGCGATTGTAGGACTTTGGTGTATTCAGTGGCATTCAGTAAATCGTCCATCCATGAAAACAGTGATACAAATGTTGGAAGGCGAAGTAGATAAATTAGAAGTACCTCCTACTCCTTTTGATTTCACTACTTCAACTGTTACTCCAACAAGACATTTGAATTTAGAGTTAGACGTGATTCATGAATTAGAATAA 1575 0.3816 MSLVWVLLQKQGNGEVQQVQLPSNPDALQGLNLSVSYINNQSQFMYVSLRDPEDIKGCNARLFLQRCLYNSSIYPFEYEVIEEDNVTFFNCSSAWSIYGSRSCPILAFGSQESVLSENHNLTSCTMISRLHSLIPAEYLQNNEFHLKWMFQPKVESHKTRIILSSTGSIVLLLLLVVCFYICRYFKHKGEDQVRLETFLKDYQALKPTRFSYAGIKRITHKFKDKLGEGAHGTVFKGKLSTEIQVAVKVLNNSDHDRKDFINEMGTMGKIHHINIVRLLGFCADGCHRALVYDFFPNGSLQKFISYPNNKEIFLGWSKLQQIALDIAKGIEYLHQGCDYRILHFDINPHNVLLDNNFTPKISDFGLAKLCSKDQSTVSMTAAKGTPGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIDTNQVLYPEWIHNLIERGEAVSIYIEDEVDIRIAKKLAIVGLWCIQWHSVNRPSMKTVIQMLEGEVDKLEVPPTPFDFTTSTVTPTRHLNLELDVIHELE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01989 524 PANTHER RUST RESISTANCE KINASE LR10-RELATED 194 504 IPR045874 GO:0004672
Accr4g01989 524 Gene3D Phosphorylase Kinase; domain 1 196 294 - -
Accr4g01989 524 SUPERFAMILY Protein kinase-like (PK-like) 203 487 IPR011009 -
Accr4g01989 524 ProSitePatterns Protein kinases ATP-binding region signature. 226 248 IPR017441 GO:0005524
Accr4g01989 524 FunFam serine/threonine-protein kinase PBS1-like 189 294 - -
Accr4g01989 524 FunFam PR5-like receptor kinase 295 497 - -
Accr4g01989 524 Gene3D Transferase(Phosphotransferase) domain 1 295 495 - -
Accr4g01989 524 Pfam Protein tyrosine and serine/threonine kinase 221 486 IPR001245 GO:0004672|GO:0006468
Accr4g01989 524 SMART serkin_6 220 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01989 524 ProSiteProfiles Protein kinase domain profile. 220 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01989 Accr-Chr4 23825896 23827552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01989 162 499 Receptor kinase-like Gene Family AT1G66910 45.326 4.31e-100 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr4g01989 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01989 - - tpra:123893290 569.311