Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01986 ATGAAGAAGAATTGTCAGCAGAGAAACGACGTCCGGCAGTACCACAAATCCGAGCTTCCCCGGCTCCGGTGGACACCGGAACTCCACCGCCACTTTGTTGAAGCTGTTGAAACCCTCGGTGGTCAAGATAAGGCAACACCGAAGCGAATTTTGCAGATGATGCGTGTCAAAGGATTGAGGATTTCCCACGTTAAGAGCCATCTTCAGATGTACAGAAACATGAAGGGGCATTCCATTATGTCACAAGTTCATCATCATCATAATCATCAAGCACATAAAGGAAAAGCTCATCAAGCTCGTGATAATAATGACCTTCATATCTGCTGCATTTGCTTACCCCAAAGATCGCCGGGAACAAAACTTTTAACATCAAAATATAACAACAGTGTGAAGAGAGAACTGCATCCGTTGGATATCAAAGGGCTTTCGCAAAGCAGTGAAGAATTTTATTATGATCTCAATCAGGAGCCTTATACAACGACAAGTACAGATAATAGTGGGACTGCTCCATTTGGTGACCATTCATTCTCTTTTAATCACACACATCTGCTTCCAGTAAACATCATGCACAGTGTGCAAGACGAAGAAGACGGCCATGGCGATGATGATGACGAAAACGAAGAAGAACAAGTCGTTCATGACTCTACTAGTTCAACAGAGTCTCTTGGAGGGAATAATCACATAAACTTAGACCTAACCATTTGA 705 0.4298 MKKNCQQRNDVRQYHKSELPRLRWTPELHRHFVEAVETLGGQDKATPKRILQMMRVKGLRISHVKSHLQMYRNMKGHSIMSQVHHHHNHQAHKGKAHQARDNNDLHICCICLPQRSPGTKLLTSKYNNSVKRELHPLDIKGLSQSSEEFYYDLNQEPYTTTSTDNSGTAPFGDHSFSFNHTHLLPVNIMHSVQDEEDGHGDDDDENEEEQVVHDSTSSTESLGGNNHINLDLTI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01986 234 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
Accr4g01986 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Accr4g01986 234 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 74 IPR006447 GO:0003677
Accr4g01986 234 FunFam Myb family transcription factor 18 76 - -
Accr4g01986 234 SUPERFAMILY Homeodomain-like 20 73 IPR009057 -
Accr4g01986 234 Gene3D - 19 76 - -
Accr4g01986 234 MobiDBLite consensus disorder prediction 193 234 - -
Accr4g01986 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 101 IPR046955 GO:0003700
Accr4g01986 234 MobiDBLite consensus disorder prediction 215 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01986 Accr-Chr4 23696680 23721544 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01986 6 75 G2-like Transcription Factor Family AT2G42660 65.714 6.25e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr4g01986 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01986 - - pcin:129318851 283.108