Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01978 ATGCTTAATTTCCTGTTTGCAAGATTATCTTTGTTACCAACATGCAAGAGGAGGCACCATTTAGGGTTTCTCCTTAGCAACGCCTCCCACATTTTCAATTCGTTTTCTTCAGTAGTGGACTCATCTGAATCTGCTTTGTCCAAGCGAAATCAAGAGGAGCAAGAAGCATCCAAAGGGATTAAATTGAAAGACTTAGACCTAGATAAAGCCGATTCCATATGTAACATTTTCAGGAGTTATGGATTTTCAGAGACCCAGATTTCCAAAGCTGTAAGAACTTGCCCTCAACTGCTTCGTATGAGTCCAGAGATACTTCTGCCCAAACTGAGGTTTCTCGACTCTTTTGGTTTTTCTAGGTCCGAACTCCCGGAAATCCTCTCTTCTAGTTCTATGATCTTAAGATGGAACCTAGAGAAATGTTTGATCCCACGTGTTGAGGCCCTTAAGAGTGTTGTTGGCAATGATTATGAGAGACTCTCACTAGCTTTAAGACGCAGCGGGTGGATTTTTCTTCAACAGGATGTAACTAATGTAGCTCCAAACATGAAGGTTTTGAGAGAACATGGAGTTCCCCAATCTTCTATTACTCAACTTATAACTAATCATGCAGGACTTGCCTTTATAGAGCCTGCAAAGTTTGCTGAACATGTCAAGTTTTCTATGGAAATAGGAATTGAACCAGTTAAGCTAACGTTAATCAAGGCACTTTATGTGTTAGCAGCAACAAGGAAATCAACTTGGAAGTCAAAGCTTGATGCATTTGAGAGGTGGGGCTGGTCCAAGGATATGACTCATTCTGTTTTTAGAAAGTTTCCATATTGTATGACACTGTCAGAGAACAAAATTGCAAACTCGATGAAGTTTCTTGTGGATGAAATGAGTTTGACATTTGAAGACATAGAAACATGCCCAGTGCTTCTTGGCTATAGCTTGAAGCAAAGGGTTGCTCCTAGATGGTCAGTAGTTAAAACTTTGAAAATGAAGGGTTTGTTCACGAAAAAAGTGGCACCAAGGAGCATTTTTGGATTGAGTGAGAAAGAGTTTCTAGAGAAATATGTGAGCAGATTCCAGGAAAGCTGTCCCCAGCTTTTGAGCATTTATAAAGATTCAAAAGCATCAGTGCCTGAAGTTCATTGA 1137 0.4002 MLNFLFARLSLLPTCKRRHHLGFLLSNASHIFNSFSSVVDSSESALSKRNQEEQEASKGIKLKDLDLDKADSICNIFRSYGFSETQISKAVRTCPQLLRMSPEILLPKLRFLDSFGFSRSELPEILSSSSMILRWNLEKCLIPRVEALKSVVGNDYERLSLALRRSGWIFLQQDVTNVAPNMKVLREHGVPQSSITQLITNHAGLAFIEPAKFAEHVKFSMEIGIEPVKLTLIKALYVLAATRKSTWKSKLDAFERWGWSKDMTHSVFRKFPYCMTLSENKIANSMKFLVDEMSLTFEDIETCPVLLGYSLKQRVAPRWSVVKTLKMKGLFTKKVAPRSIFGLSEKEFLEKYVSRFQESCPQLLSIYKDSKASVPEVH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01978 378 FunFam Mitochondrial transcription termination factor-like 137 360 - -
Accr4g01978 378 PANTHER CGI-12 PROTEIN-RELATED 41 355 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 Gene3D Transcription termination factor 3, mitochondrial 153 360 IPR038538 -
Accr4g01978 378 Pfam mTERF 75 290 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 Pfam mTERF 243 349 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 SMART mt_12 160 191 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 SMART mt_12 123 155 IPR003690 GO:0003690|GO:0006355
Accr4g01978 378 SMART mt_12 88 118 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01978 Accr-Chr4 23556169 23557305 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01978 mTERF 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01978 K15031 - cave:132166617 244.202