Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01975 ATGCTGAACTTTGTCATTGCGCGATTATCGTCCTCACAAACATGCCAGAAGAGGACTCAACTAGGATTTCTCCTCTTCAATGCTTCCCACATTTTCCATTCTTTTTCTTCCGTAGTGAAATCACCTAAACCGAACCAAAAACTGAAAGGAAATGGATCGCTTACAGTTTCTTACCTCATTAACTCTTGTGGCATGTCTGCCAAAGTAGCTATTGAAGTTTCCAAAAAGGTTCGTTTAAAATCCCCTCGTAATCCCGATTCTGTTCTTAATCTTTTCCGGAGCTACGGATTCTCTGATAAACAGATCTCCAAAATTGTAAAACATATTCCAATTCTGCTTTTGGCTAAACCCGAGAAGACTATTTCACCTAAGCTTAGGTATTTCCAGTCTTTAGGGTTTTCATGTTCTGAGCTCCAAGCACTTCTCATGTCTCACTCTTCAATCTTGGACTGGAGCTTAAAGAACCGTTTGATTCCCTTTGGTGAGGCCCTTAAGAGTGTTCTTAATGACGGTGTGAAAGTAAAAATAGCTTTTAAACGGTCAAGACGGTTTCTGATCTGCTGGGATGTGAACAATTTAGCTCCAAACTTAAAAGTTTTGAGAGACTTTGGAGTTCCTGAATCTTCTGTTTGTGCGTTGTTAACTAGATTGCCAAATGCAGCATTTATGAATCCTGCCAAATTTGTTGAATGTGTCAAGTTTGCTAAGGAAGCAGGAATTGATTCTTCTAAGGTCGTGTTCATTCAAGCTGTTGCTGTTTTGGCACAGGTAAATAAACCAAACTGGGAGTCAAAAGTTGATCTGTTAGAGAGGTATGGCTGGACTAGGAATCTCACTATAAAAGCATTCAGAAAGTTTCCAAATTGCATGCTTCTGTCAAAAGAAAATATCACAGAAAAAATGAAGTTTCTTGTGAATGAAATGGGTTGCTCAATGGAAGATATAGCGGAATGCCCAATAATTCTTTGCTATAGCTTGAAGCGGGTTATTCCAAGATGGTCAGTAGTTAAAGCTTTGAAAATCAATGGTTTGGCTGCAGATAACAAGTGGTCGTTACCTTACATTATCATTCTAAGTGAGAAGTTGTTTAGGGAAAAGTTTGTGATCAGATTTCAGGAAGTTGTTCCTGAGCTACCGAAAATCTATGAAGATGAACTCAGAGCTTTATCTCAGGTCGGGGGTAAAAAAAAATCTGAGCTTTATCTGAATGTCAATCCCAGGTAG 1224 0.3889 MLNFVIARLSSSQTCQKRTQLGFLLFNASHIFHSFSSVVKSPKPNQKLKGNGSLTVSYLINSCGMSAKVAIEVSKKVRLKSPRNPDSVLNLFRSYGFSDKQISKIVKHIPILLLAKPEKTISPKLRYFQSLGFSCSELQALLMSHSSILDWSLKNRLIPFGEALKSVLNDGVKVKIAFKRSRRFLICWDVNNLAPNLKVLRDFGVPESSVCALLTRLPNAAFMNPAKFVECVKFAKEAGIDSSKVVFIQAVAVLAQVNKPNWESKVDLLERYGWTRNLTIKAFRKFPNCMLLSKENITEKMKFLVNEMGCSMEDIAECPIILCYSLKRVIPRWSVVKALKINGLAADNKWSLPYIIILSEKLFREKFVIRFQEVVPELPKIYEDELRALSQVGGKKKSELYLNVNPR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01975 407 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 SMART mt_12 312 342 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 SMART mt_12 211 241 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 SMART mt_12 29 66 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 Pfam mTERF 251 363 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 Pfam mTERF 89 247 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 PANTHER CGI-12 PROTEIN-RELATED 55 369 IPR003690 GO:0003690|GO:0006355
Accr4g01975 407 Gene3D Transcription termination factor 3, mitochondrial 162 374 IPR038538 -
Accr4g01975 407 FunFam Mitochondrial transcription termination factor-like 153 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01975 Accr-Chr4 23533349 23534572 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01975 mTERF 6.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01975 K15031 - qsu:111998476 306.219