Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01971 ATGATTAATTTTCTGATTGCAAGATCATTTGTGTCACAAGCATGCCAGAGGAGGAGCCGTTTGGGTTTTCTCCATCCCAATGCTTCCCACATTTTCAATTCTTTTTCTTCGGTGGTGAAATCATCTGAATCTGCTAAACCAAAGCAAAAGAAAGTACATGAATCGTCTACCGTTTCTTATCTCATGAACTCCTGTGGCATTTCCCCCAAACTAGCTTTTGAAGTATCCAAAAAGGTTAATTTGAAAGACCCAGATAACCCCACCCTGATACTTAATCTCTTTAAGAGCTATGGATTCTCAAATTCTCAGATATCCAAGATTGTGATAAAGCATCCATCCGTGCTTTTGACTCAGGAGAATATCCTTTTGCCTAAGCTAAAGTTTTTCGAATCCATAGGATTTTCCAGATCTGAAATCCCAGAACTTCTAACCTATAACATTCGATTGCTAGTCTGGAGCTTACGGAACCGAATAATCCCTGGTTATGAGGGCCTAAAGAGTGTGATTGGTGACAATCATGAAATGCATACAATAATTAGCAAACGCAAAGGATGGCATTTTCTGCACTACGATGTGAAGAATTTAGCCCCAAACTTGAAGGTTTTGAGAGAGCTTGGAGTACCTAAATCTTCTCTCAACGTGCTGCTAAATAGGTTTACCAGTGCAGCATCTGTGGATCATGCAAAGTTTGTTGAACATGTGAAGTTTGCTAAAGAAATAGGGGTTAACCCCTTTAGGGTTACGTTCATCTACTCTATTCATGCCTTGTCAATGACAAAGAAATCAACTTGGGAGTCAAAGCTGGATATCTATGAGAGGTGTGGCTGGTCCAGGTATGAGACTCTTTCCGCATTCAGGAAGTTTCCGTATTGTATGTTGATATCCGAGGAGAAGATCACGAGCACTATTAAATTTCTTGGGGATGAACTGAATTTGTCATCAAAAGATATAGTTAGATCCCCAGCATATCTTGGTTATAACTTGAAGCACAGGATTATTCCTAGATCCTCAGTTTTTAAAACTTTGAGAATGAAGGGTCTGATTGATAATGATATGCCCTTATTTTCCTTGATCAGATTAAGTGAGGAAATGTTCCTGGAGAAATTTGTTTTCAGATTTCAAGAAAGTGCTCCTGAGCTGTTGAACATTTATCTAGATCAGCTAAAACATTCACCTGAAGCTCTGAAGTCTTCAAGTGTATGA 1203 0.3899 MINFLIARSFVSQACQRRSRLGFLHPNASHIFNSFSSVVKSSESAKPKQKKVHESSTVSYLMNSCGISPKLAFEVSKKVNLKDPDNPTLILNLFKSYGFSNSQISKIVIKHPSVLLTQENILLPKLKFFESIGFSRSEIPELLTYNIRLLVWSLRNRIIPGYEGLKSVIGDNHEMHTIISKRKGWHFLHYDVKNLAPNLKVLRELGVPKSSLNVLLNRFTSAASVDHAKFVEHVKFAKEIGVNPFRVTFIYSIHALSMTKKSTWESKLDIYERCGWSRYETLSAFRKFPYCMLISEEKITSTIKFLGDELNLSSKDIVRSPAYLGYNLKHRIIPRSSVFKTLRMKGLIDNDMPLFSLIRLSEEMFLEKFVFRFQESAPELLNIYLDQLKHSPEALKSSSV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01971 400 PANTHER CGI-12 PROTEIN-RELATED 55 371 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 SMART mt_12 105 135 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 SMART mt_12 247 277 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 SMART mt_12 176 208 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 SMART mt_12 29 68 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 FunFam Mitochondrial transcription termination factor-like 154 377 - -
Accr4g01971 400 Pfam mTERF 91 244 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 Pfam mTERF 261 366 IPR003690 GO:0003690|GO:0006355
Accr4g01971 400 Gene3D Transcription termination factor 3, mitochondrial 165 377 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01971 Accr-Chr4 23504242 23505444 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01971 mTERF 5.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01971 K15031 - qsu:111998476 314.309