Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01970 ATGCTAATTTTTCTGATTGCCAGATTATCTTCGTCCTTGCCATGCGGTACGAGAACCCAATTAGGGTTTCTCCGTCTCAATGCTTCCCTCACCTCTCATTCCTTTTCTTCGGTAGTGAAGTCATCTGAATCAATTCGCTCCGAACAAAATCGAGCCGAAAGTGAGTCATTTACAGTTTCTTACCTCGTGAACTCATGTGGCGTATCCGCCAGAGATGCTGAAGAATTATCCAAAAGGGTTAAACTGAAAGACCCTGATAATCCCGATTCGGTACTTAAACTTCTCCGAAGCTACGGATTCTCAGGTACTCATATATCTAAAGTTTTGAAATACAATCCACGATTGCTTTTGGCAAAGCCTGAGAAGAACCTTTTGCCCAAGTTAAGGTTTCTCCAGTCTATAGGGTTCTCAGCTTCTGAAATCCCAGAGTTCCTCTCTTCTTACTCTAGATTACTGACTTCAAGCTTAGAGAAACGTATAATTCCCCATTACGAGGCCCTAAAAAGTGTGCTGGGTGATCCTGTTAAAGCAAGAAGATGTTTGAAAAGCTCAAGGGGGAGTATTTTGTCCTATAGCTATGGTGTAAAGAATATATTTCCAAACATAAAGGTCTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCTTTACGCTTTTATTTAAAGATGCAAATCTAGCATTTACGAATCAATCTAAGTTTGTTGAATATGTCAAGTTTGTCAAAGAAACAGGAATCGAACCTTCCAAGGTTACATTCGTTTATGCACTTTTTGCTGTAACACACTTGAGTAAATCAACATGGGAGTGGAAACTGGATTTCTTTGAGAGGTGTGGCTGGTCCAGAGATGTCACTCTTTCGGCATTCAGTAAGTTTCCAGTCATCATGCTTTTGTCAGAGAAGAAAATCACAAACACATTGAAATTTTTTGTGGATGAAATGGGTTTGCGGTTGGAAGATGCAGCTGGATGCCCGACAATTTTCAGCTATAGTTTAAAGCGGAGGATTATTCCTAGATGGTCTGTATTTCAAATCTTGAAAATGAAGGGTTTAGTCAAGGCTAATATGTCCATACCTTCCATGATTATTATGAGTGAGGAAAAGTTTCTGGAAAATTTTGTGATCAAATTTCAAGAGGATGTTCCTCAGCTACTGAAACTTTATAGAGGTGAATTGGGATCTTTACCTGAATTTCAGGCATAG 1200 0.395 MLIFLIARLSSSLPCGTRTQLGFLRLNASLTSHSFSSVVKSSESIRSEQNRAESESFTVSYLVNSCGVSARDAEELSKRVKLKDPDNPDSVLKLLRSYGFSGTHISKVLKYNPRLLLAKPEKNLLPKLRFLQSIGFSASEIPEFLSSYSRLLTSSLEKRIIPHYEALKSVLGDPVKARRCLKSSRGSILSYSYGVKNIFPNIKVLRDEGVPQSSVFTLLFKDANLAFTNQSKFVEYVKFVKETGIEPSKVTFVYALFAVTHLSKSTWEWKLDFFERCGWSRDVTLSAFSKFPVIMLLSEKKITNTLKFFVDEMGLRLEDAAGCPTIFSYSLKRRIIPRWSVFQILKMKGLVKANMSIPSMIIMSEEKFLENFVIKFQEDVPQLLKLYRGELGSLPEFQA 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01970 399 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 SMART mt_12 216 246 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 SMART mt_12 317 348 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 Gene3D Transcription termination factor 3, mitochondrial 181 382 IPR038538 -
Accr4g01970 399 FunFam Mitochondrial transcription termination factor-like 156 380 - -
Accr4g01970 399 PANTHER CGI-12 PROTEIN-RELATED 53 375 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 Pfam mTERF 235 369 IPR003690 GO:0003690|GO:0006355
Accr4g01970 399 Pfam mTERF 92 251 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01970 Accr-Chr4 23487572 23488771 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr4g01970 mTERF 4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01970 K15031 - cave:132171725 302.367